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Algorithmic imaging methods that reconstruct quantitative phase and amplitude
Computational microscopy combines tailored illumination, coherent scattering, and algorithmic reconstruction to generate quantitative 2D and 3D images
Computational_microscopy
Indirectly forming images from measurements using algorithms
density, strain, refractive index, or motion. Computational imaging is used in computational microscopy, medical imaging, computed tomography, magnetic
Computational_imaging
Canadian-American computer scientist
techniques that integrate optical hardware design with computational processing to advance microscopy and phase imaging. She is a Fellow of Optica (formerly
Laura_Waller
Chinese-American physicist
pioneered computational microscopy by unifying crystallography and microscopy through coherent diffraction and algorithms, replacing lenses with computation. In
Jianwei_Miao
Method of microscopic imaging
Ptychography (/t(a)ɪˈkɒgrəfi/ t(a)i-KO-graf-ee) is a computational microscopy technique that reconstructs the complex-valued image (amplitude and phase)
Ptychography
Computational imaging technique in microscopy
Fourier ptychography is a computational imaging technique based on optical microscopy that consists in the synthesis of a wider numerical aperture from
Fourier_ptychography
Optical microscope that uses fluorescence and phosphorescence
fluorescence microscopy only reveals the organization of the DNA within the cells and reveals nothing else about the cell morphologies. Computational techniques
Fluorescence_microscope
Branch of neuroscience
physiology and cognitive abilities of the nervous system. Computational neuroscience employs computational simulations to validate and solve mathematical models
Computational_neuroscience
Series of techniques in optical microscopy
microscopy with closed pinhole or aided by computational methods such as deconvolution or detector-based pixel reassignment (e.g. re-scan microscopy,
Super-resolution_microscopy
Type of electron microscope
doi:10.1002/2016JD026094. Baghaei Rad, Leili (2007). Computational Scanning Electron Microscopy. International Conference on Frontiers of Characterization
Scanning_electron_microscope
Specialist field of computer science
into computational specializations, this field of study includes: Algorithms (numerical and non-numerical): mathematical models, computational models
Computational_science
Lensless computational imaging method
Coherent diffractive imaging (CDI) is a computational microscopy method that reconstructs images from coherent diffraction patterns without the use of
Coherent_diffraction_imaging
Optical microscopy technique
Phase-contrast microscopy (PCM) is an optical microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness
Phase-contrast_microscopy
Electron microscopy technique
Cryogenic electron microscopy (cryo-EM) is a transmission electron microscopy technique applied to samples cooled to cryogenic temperatures. Developed
Cryo-electron_microscopy
Optical imaging technique
Confocal microscopy is an optical imaging technique for increasing optical resolution and contrast of a micrograph by means of using a spatial pinhole
Confocal_microscopy
Digital image processing technique
images have a very shallow depth of field; macro photography and optical microscopy are two typical examples. Focus stacking can also be useful in landscape
Focus_stacking
Imaging by sections or sectioning using a penetrative wave
they represent a compromise between accuracy and computation time required. FBP demands fewer computational resources, while IR generally produces fewer artifacts
Tomography
Tomography technique
Bibcode:2010ApPhL..96v3108X. doi:10.1063/1.3442496. Miao, Jianwei (2025). "Computational microscopy with coherent diffractive imaging and ptychography". Nature. 637
Electron_tomography
Association of German research institutes
Planck-Humboldt Medal Laura Waller University of California, Berkeley Computational microscopy 2023 Max Planck-Humboldt Research Award Rotem Sorek Weizmann Institute
Max_Planck_Society
Advanced ultrasound imaging technique
Ultrasound Localization Microscopy (ULM) is an advanced ultrasound technique used for animal and human imaging. By localizing microbubbles, ULM overcomes
Ultrasound Localization Microscopy
Ultrasound_Localization_Microscopy
American physicist
Transmission Electron Microscopy". Physical Review Applied. 17 (3). doi:10.1103/PhysRevApplied.17.034066. ISSN 2331-7019. Computational microscopy The Lemelson
Kayla_Nguyen
American engineer (1949–2021)
monograph, Computational Electrodynamics: The Finite-Difference Time-Domain Method. In 1998, he edited the research monograph, Advances in Computational Electrodynamics:
Allen_Taflove
Method of examining cell surfaces at the molecular level
In cellular biology, traction force microscopy (TFM) is an experimental method for determining the tractions on the surface of a cell by obtaining measurements
Traction_force_microscopy
Turkish-American engineer and academic
scientific journal eLight. Ozcan's main research interests includes computational microscopy, point-of-care testing and optical computing. His research laboratory
Aydogan_Ozcan
Imaging mode of electron microscopes
High-resolution transmission electron microscopy is an imaging mode of specialized transmission electron microscopes that allows for direct imaging of
High-resolution transmission electron microscopy
High-resolution_transmission_electron_microscopy
Fluorescence microscopy technique
Light sheet fluorescence microscopy (LSFM) is a fluorescence microscopy technique with an intermediate-to-high optical resolution, but good optical sectioning
Light sheet fluorescence microscopy
Light_sheet_fluorescence_microscopy
BY 4.0 licensing Phase shift time-lapse microscopy video of a triploid cell division Cell identification with computational 3D holographic microscopy
Quantitative phase-contrast microscopy
Quantitative_phase-contrast_microscopy
Set of digital image capture and processing techniques
Computational photography refers to digital image capture and processing techniques that use digital computation instead of optical processes. Computational
Computational_photography
Branch of biology that studies cells
biochemistry, and cell composition. The study of cells is performed using microscopy techniques, cell culture, and cell fractionation. These are used for research
Cell_biology
Study of the nervous system
confocal microscopy, design-based stereology, neuron tracing and neuron reconstruction. Current innovations and future research include virtual microscopy, automated
Neuromorphology
Form of electron microscopy
4D scanning transmission electron microscopy (4D STEM) is a subset of scanning transmission electron microscopy (STEM) which utilizes a pixelated electron
4D scanning transmission electron microscopy
4D_scanning_transmission_electron_microscopy
Method of 3D bioimaging
Serial block-face scanning electron microscopy is a method to generate high resolution three-dimensional images from small samples. The technique was developed
Serial block-face scanning electron microscopy
Serial_block-face_scanning_electron_microscopy
Type of convolutional neural network
Boundary Detection for Bright-Field Transmission Electron Microscopy Images via U-Net". Microscopy and Microanalysis. 29 (6): 1968–1979. arXiv:2312.09392
U-Net
Computational imaging technique
ISBN 978-1-4987-0806-7. Ghezzi, Alberto (24 May 2023). "Time-resolved multispectral fluorescence microscopy based on computational imaging". POLITesi. hdl:10589/203773.
Single-pixel_imaging
Structured-illumination light sheet microscopy
Structured illumination light sheet microscopy (SI-LSM) is an optical imaging technique used for achieving volumetric imaging with high temporal and spatial
Structured illumination light sheet microscopy
Structured_illumination_light_sheet_microscopy
Erroneous AI-generated content
fictitious references. Some nonexistent phrases such as "vegetative electron microscopy" have appeared in many research papers as a result of having become embedded
Hallucination (artificial intelligence)
Hallucination_(artificial_intelligence)
Russian materials scientist
Physics/Applied Physics Letters, and Nature Partner Journal Computational Materials. Electron Microscopy Quantum Materials S. Kalinin's Google Scholar AE-SPM
Sergei_V._Kalinin
Consortium for microscopy image data
The Open Microscopy Environment, or OME, is a consortium that develops open-source infrastructure for microscopy. OME is known for maintaining the OMERO
Open_Microscopy_Environment
Management Core Unit (QMCU) Translational Surgery Core Unit (TSCU) Computational Microscopy Core Unit (CMCU) The TRM Leipzig selects and funds investigator-initiated
Translational Centre for Regenerative Medicine
Translational_Centre_for_Regenerative_Medicine
Study of how computers can be used to generate images
(2003). Computational Visualistics, Media Informatics, and Virtual Communities. Deutscher Universitätsverlag. Jörg R.J. Schirra (1999). "Computational Visualistics:
Computational_visualistics
Branch of neuroscience
connections can be determined by correlative electron microscopy. Serial section electron microscopy has been extensively developed for use in studying nervous
Neuroanatomy
Research of materials
independent, endeavors. Materials characterization (spectroscopy, microscopy, diffraction) Computational materials science Materials informatics and selection There
Materials_science
Quantitative phase microscope
holographic microscopy (DHM) is digital holography applied to microscopy. Digital holographic microscopy distinguishes itself from other microscopy methods
Digital holographic microscopy
Digital_holographic_microscopy
Computational analysis of large, complex sets of biological data
be referred to as computational biology; however, the distinction between the two terms is often disputed. The term computational biology can refer to
Bioinformatics
known as coherent diffraction imaging (CDI), lensless imaging, or computational microscopy. 1999 - A team led by Michael O'Keefe and Omar Yaghi synthesized
Timeline_of_crystallography
Field of study in molecular properties
have enabled wider use of computational modeling and simulation in the investigation of molecular-scale systems. Computational chemistry High performance
Molecular_engineering
Division of the University of Basel
Molecular Biology. The bachelor's degree program in Computational Sciences leading to a Major in Computational Biology also starts with one year of basic studies
Biozentrum University of Basel
Biozentrum_University_of_Basel
American computational biologist
Robert F. Murphy is an American computational biologist. He is the Ray and Stephanie Lane Professor of Computational Biology Emeritus at Carnegie Mellon
Robert F. Murphy (computational biologist)
Robert_F._Murphy_(computational_biologist)
Computing algorithm
1989). "Three-dimensional visualization methods for confocal microscopy". Journal of Microscopy. 153 (2): 123–132. doi:10.1111/j.1365-2818.1989.tb00553.x
Simulated fluorescence process algorithm
Simulated_fluorescence_process_algorithm
Multi-photon microscopy technique
(CRS) microscopy is a multi-photon microscopy technique based on Raman-active vibrational modes of molecules. The two major techniques in CRS microscopy are
Coherent Raman scattering microscopy
Coherent_Raman_scattering_microscopy
Comprehensive map of neural connections in the brain
neurons and their interconnections. These are usually obtained by electron microscopy (EM) and have a scale of nanometers. They are only available for small
Connectome
Synchrotron X-ray diffraction-based imaging technique
Dark-field X-ray microscopy (DFXM or DFXRM) is an imaging technique used for multiscale structural characterisation. It is capable of mapping deeply embedded
Dark-field_X-ray_microscopy
American scientist
Carpenter transitioned into a computational researcher during this time. Her research focused on high-throughput microscopy and living cell microarrays
Anne_E._Carpenter
Integrated circuit technology
the brain’s morphology and computational strategies. Neuromorphic systems aim to enhance energy efficiency and computational power for applications including
Neuromorphic_computing
algorithm is used in the simulation of high resolution transmission electron microscopy (HREM) micrographs, and serves as a useful tool for analyzing experimental
Multislice
Three-dimensional arrangement of atoms in an amino acid-chain molecule
critical for many efforts in computational biology such as structure based drug design, both in developing the computational methods used and in providing
Protein_structure
Single-molecule sequencing technology
Transmission electron microscopy DNA sequencing is a single-molecule sequencing technology that uses transmission electron microscopy techniques. The method
Transmission electron microscopy DNA sequencing
Transmission_electron_microscopy_DNA_sequencing
Scientific study of the nervous system
physical models of neurons for the purposes of useful computation. The emergent computational properties of neuromorphic computers are fundamentally
Neuroscience
higher-order continuum theories and reliability methods for computational failure analysis: COMPUTATIONAL FAILURE ANALYSIS". International Journal for Numerical
Metallurgical failure analysis
Metallurgical_failure_analysis
Scanning electron microscopy technique
Electron backscatter diffraction (EBSD) is a scanning electron microscopy (SEM) technique used to study the crystallographic structure of materials. EBSD
Electron backscatter diffraction
Electron_backscatter_diffraction
transport-of-intensity equation (TIE) is a computational approach to reconstruct the phase of a complex wave in optical and electron microscopy. It describes the internal
Transport-of-intensity equation
Transport-of-intensity_equation
Measurement of infrared radiation's interaction with matter
instruments. Various forms of infrared microscopy exist. These include IR versions of sub-diffraction microscopy such as IR NSOM, photothermal microspectroscopy
Infrared_spectroscopy
Interdisciplinary research area
Computational biology involves the development and application of data-analytical and theoretical methods, mathematical modeling and computational simulation
Molecular_biophysics
American scientist
UW-Madison's integrated Microscopy Resource Center, eventually becoming a project manager for the Laboratory for Optical and Computational Instrumentation, the
Kevin_Eliceiri
Imaging technique
in amplitude and phase it is possible to extend the depth of focus in microscopy. The digital analysis of a set of holograms recorded from different directions
Digital_holography
Subfield of condensed matter physics
systems. Optical microscopy can be used in the study of colloidal systems, but more advanced methods like transmission electron microscopy (TEM) and atomic
Soft_matter
Research institute in Virginia, USA
neuronal circuits, and the development of imaging technologies and computational methods for image analysis. In 2017, it announced a new research area
Janelia_Research_Campus
Non-crystalline solid
species that are present. Fluctuation electron microscopy is another transmission electron microscopy-based technique that is sensitive to the medium-range
Amorphous_solid
Term for chemical syntheses
demonstrated using a technique referred to as inverted-mode scanning tunneling microscopy (IM-STM). Prior to this work, there had been no non-biological chemical
Mechanosynthesis
Physicist
at Cornell for Nanoscale Science. He is known for his work in electron microscopy, condensed matter physics, and discovery of atomic structure across a
David_A_Muller
Any technique to improve resolution of an imaging system beyond conventional limits
techniques are used in general image processing and in super-resolution microscopy. Several concepts are fundamental to super-resolution imaging: Diffraction
Super-resolution_imaging
Optical imaging method
Time stretch microscopy, also known as serial time-encoded amplified imaging/microscopy or stretched time-encoded amplified imaging/microscopy' (STEAM),
Serial time-encoded amplified microscopy
Serial_time-encoded_amplified_microscopy
Image processing software
features in images, particularly those obtained through fluorescence microscopy. Distributions are available for Microsoft Windows, macOS, and Linux.
CellProfiler
Study of molecular structures in biology
techniques are X-ray crystallography, nuclear magnetic resonance, and electron microscopy. Through the discovery of X-rays and its applications to protein crystals
Structural_biology
Recording to reproduce a three-dimensional light field
three-dimensional images, and has a wide range of other uses, including data storage, microscopy, and interferometry. In principle, it is possible to make a hologram for
Holography
informatics is a subfield of bioinformatics and computational biology. It focuses on the use of computational techniques to analyze bioimages, especially
Bioimage_informatics
with more than 99% confidence. Computational and theoretical work in the area of quantum energy flow, quantum computation, and quantum information, as well
Martin_Gruebele
Research institute in Martinsried, Germany
Biophysics: Biophysics, Fluorescence Correlation Spectroscopy, Atomic Force Microscopy, Single Molecule, Synthetic Biology (Petra Schwille) Cellular Biochemistry:
Max Planck Institute of Biochemistry
Max_Planck_Institute_of_Biochemistry
American bioengineer and academic
in the fields of optical coherence tomography, multi-photon microscopy, and computational imaging. Boppart was born in the small farming community of
Stephen_Boppart
Three-dimensional imaging technique
proposed in the fields of holographic information and computational reduction as well as in computational and quantization techniques. The algorithms can be
Computer-generated_holography
German-born American biophysicist and Nobel laureate (born 1940)
ISBN 978-981-4522-80-9. Herman, Gabor T.; Frank, Joachim (2014), Computational Methods for Three-Dimensional Microscopy Reconstruction, springer, ISBN 978-1-4614-9520-8
Joachim_Frank
Austrian biomechanician
or macro-scales, using polarized light microscopy, second-harmonic imaging, and two-photon excitation microscopy together with medical image processing
Gerhard_A._Holzapfel
Research institute in Milan, Italy
Human Technopole conducts research in genomics, structural biology, computational biology, and related areas of biomedical science. The institute was
Human_Technopole
American biotechnology company
multiple diseases, including SARS-CoV-2, the virus causing COVID-19. Its computational platform integrated vast datasets of protein structures and genetic
Generate:Biomedicines
Hypothetical process of digitally emulating a brain
substrate-neutral computational processes. Other scientists, including Roger Penrose, believe consciousness may emerge from some form of quantum computation that depends
Mind_uploading
Sub-field of pathology
digitized specimen slides. It utilizes computer-based technology and virtual microscopy to view, manage, share, and analyze digital slides on computer monitors
Digital_pathology
Extinct genus of dinocaridids
Maotianshan Shales of Yunnan Province, China. It was described after using computational approaches to visualize the internal details preserved inside the fossil
Youti
Biochemical interaction through which a drug produces its pharmacological effect
induce phenotypic changes in target cells, changes that are observable by microscopy and that can give insight into the mechanism of action of the compound
Mechanism_of_action
Differential dynamic microscopy (DDM) is an imaging-based optical technique that enables performing light scattering-like experiments by means of a conventional
Differential dynamic microscopy
Differential_dynamic_microscopy
Topics referred to by the same term
manganite, a crystal used as a cathode material Laser scanning microscopy, a microscopy technique used in biology and nano-crystal imaging Least squares
LSM
Study of external forms and structures of organisms
via parallel or convergent evolution. The invention and development of microscopy enabled the observation of 3-D cell morphology with both high spatial
Morphology_(biology)
Biological membrane structure
bilayers often require advanced techniques like electron microscopy and atomic force microscopy. When phospholipids are exposed to water, they self-assemble
Lipid_bilayer
Combining information from two detectors
with far less than N measurements and may have applications in LIDAR and microscopy. The U.S. Army Research Laboratory (ARL) developed remote ghost imaging
Ghost_imaging
Interdisciplinary science
bioengineering, computational biology, biomechanics, developmental biology and systems biology. Fluorescent imaging techniques, as well as electron microscopy, x-ray
Biophysics
Light microscopy technique
In light microscopy, oil immersion is a technique used to increase the resolving power of a microscope. This is achieved by immersing both the objective
Oil_immersion
American computer graphics researcher
light-field camera and light-field microscope, and on computational photography. The phrase "computational photography" was first used by Steve Mann in 1995
Marc_Levoy
Research institute in Berlin, Germany
Giesecke-Thiel) Mass Spectrometry Facility (David Meierhofer) Microscopy & Cryo-Electron Microscopy Unit (Thorsten Mielke) Sequencing Core Facility (Bernd Timmermann)
Max Planck Institute for Molecular Genetics
Max_Planck_Institute_for_Molecular_Genetics
Mathematical function in general imaging
function (CTF) sets the resolution of high-resolution transmission electron microscopy (HRTEM), also known as phase contrast TEM. By considering the recorded
Contrast_transfer_function
Overview of and topical guide to biophysics
entropy. Microscopy – used in many ways, for example, to enable the use of laser instruments for scanning and transmission. Atomic force microscopy – Neuroimaging
Outline_of_biophysics
Swiss brain research initiative
positions in 737 regions of the brain. In 2019, Idan Segev, one of the computational neuroscientists working on the Blue Brain Project, gave a talk titled:
Blue_Brain_Project
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
Surname or Lastname
German
German : variant of Buss.North German (Büsse) : metonymic occupational name for a maker of boxes and containers or for a gunsmith, from Middle Low German büsse, busse ‘box’, ‘gun’, ‘rifle’.English : variant spelling of Buss.
Boy/Male
Indian, Punjabi, Sikh
Winner of Every Thing
Girl/Female
Tamil
Bud, Young
Boy/Male
Arabic, Indian, Muslim
Lamp; Light
Boy/Male
British, Hindu, Indian, Netherlands
God of Love
Female
Swiss
, Jewish; a Jewess, or, praised.
Girl/Female
English
French Emmeline, which ultimately derives from the Old German 'amal' meaning labor.
Surname or Lastname
English
English : variant spelling of Osborne.
Surname or Lastname
English (Devon)
English (Devon) : habitational name from Ponsford in Devon, recorded in Domesday Book as Pontesfort and in 1249 as Pauncefort.
Girl/Female
Tamil
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
COMPUTATIONAL MICROSCOPY
a.
Proceeding in computation by twelves; expressed in the scale of twelves.
n.
The science of numbers; the art of computation by figures.
a.
Capable of being measured; susceptible of mensuration or computation.
n.
The act or process, or the result, of calculating; computation; reckoning, estimate.
n.
The act or process of computing; calculation; reckoning.
n.
A reckoning; computation; calculation; enumeration; a record of some reckoning; as, the Julian account of time.
n.
An erroneous computation.
a.
Proceeding by sixes; sextuple; -- applied especially to a system of arithmetical computation in which the base is six.
n.
Account; reckoning; computation.
n.
Computation.
n.
A method of computation; any process of reasoning by the use of symbols; any branch of mathematics that may involve calculation.
v. t.
To exceed in reckoning or computation.
n.
The act or process of making mathematical computations or of estimating results.
v. i.
To make an enumeration or computation; to engage in numbering or computing.
n.
Enumeration; computation.
n.
The result of computation; the amount computed.
n.
The difference of the results obtained by observation, and by computation from a formula.
n.
The fifth month of the Jewish year according to the ecclesiastical reckoning, the eleventh by the civil computation, coinciding nearly with August.
n.
Reckoning; computation.
n.
Erroneous computation; false reckoning.