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In molecular biology, Cyanobacterial non-coding RNAs are non-coding RNAs which have been identified in species of cyanobacteria. Large scale screens have
Cyanobacterial_non-coding_RNA
RNA family
The first cyanobacterial RNA thermometer (RNAT) Hsp17 was found in the 5'UTR of Synechocystis heat shock hsp17 mRNA. Further study demonstrated that cyanobacteria
Cyanobacterial RNA thermometer
Cyanobacterial_RNA_thermometer
RNA family
NsiR4 (nitrogen stress-induced RNA 4), former name SyR12, is a cyanobacterial non-coding RNA which plays role in the regulation of Glutamine synthetase
NsiR4_small_RNA
Phylum of photosynthesising prokaryotes
taxon under a different code. As of 2022, the following cyanobacterial taxa are validly published under the International Code of Nomenclature of Prokaryotes
Cyanobacteria
Cyanobacterial functional RNA
Nakamura T, Naito K, Yokota N, Sugita C, Sugita M (2007). "A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions"
Yfr1
Temperature-dependent RNA structure
An RNA thermometer (or RNA thermosensor) is a temperature-sensitive non-coding RNA molecule which regulates gene expression. Its unique characteristic
RNA_thermometer
Bacterial small RNAs are small RNAs produced by bacteria; they are 50- to 500-nucleotide non-coding RNA molecules, highly structured and containing several
Bacterial_small_RNA
Family of non-coding RNAs
Yfr2 (cyanobacterial functional RNA-2 later published as Cyano-1 RNA motif) is a family of non-coding RNAs. Members of the Yrf2 family have been identified
Yfr2
RNA family
The Cyano-2 RNA motif is a conserved RNA structure identified by bioinformatics. Cyano-2 RNAs are found in cyanobacterial species classified within the
Cyano-2_RNA_motif
Non-coding RNA
In the field of molecular biology, the 6S RNA is a non-coding RNA that was one of the first to be identified and sequenced. What it does in the bacterial
6S_/_SsrS_RNA
Conserved RNA structure
cis-regulatory element, but also with a non-coding RNA that is transcribed with the ATP synthase genes. Simple RNA structures called stem-loops have been
ATPC_RNA_motif
Concept in genetics
number of protein-coding genes, typically one gene per kilobase. Mycoplasma genitalium, with a 580 kb genome and 482 protein-coding genes, is a key model
Minimal_genome
RNA family
Downstream-peptide motif refers to a conserved RNA structure identified by bioinformatics in the cyanobacterial genera Synechococcus and Prochlorococcus and
Downstream-peptide_motif
DNA located in cellular organelles called chloroplasts
carboxylase rubisco tRNAs tRNA photosystem II tRNAs tRNAs photosystem II ribosomal proteins tRNA tRNA nadh dehydrogenase ribosomal proteins tRNA replication origin
Plastid_DNA
benefit to prokaryotes having a smaller genome size with less non-coding DNA and fewer non-essential genes. There is a lot of variation in prokaryotic genome
Streamlining_theory
Plant organelle that conducts photosynthesis
ribosomal protein tRNA photosystem II tRNA tRNA ribosomal RNA tRNA ribosomal RNA tRNA ribosomal protein photosystem I nadh dehydrogenase tRNA ribosomal protein
Chloroplast
Evolutionary theory
hypothesis is based on studies of the genomes of flowering plants. Protein coding RNAs in mitochondria are spliced and edited using organelle-specific splice
Symbiogenesis
Honegger, R.; Rothwell, G. W. (2008). "Earliest fossil record of bacterial–cyanobacterial mat consortia: the early Silurian Passage Creek biota (440 Ma, Virginia
Evolutionary history of plants
Evolutionary_history_of_plants
Virus that infects cyanobacteria
are key regulators of the cyanobacterial populations in aquatic environments, and may aid in the prevention of cyanobacterial blooms in freshwater and
Cyanophage
Aspect of DNA testing
protein-coding genes (gyrB, rpoC, rpoD, rbcL, hetR, psbA, rnpB, nifH, nifD), internal transcribed spacer of ribosomal RNA genes (16S-23S rRNA-ITS) or
Microbial_DNA_barcoding
samples. Ward et al. examined cyanobacterial mat communities in a Yellowstone hot spring by using DGGE analysis of 16S rRNA gene segments of aerobic chemoorganotrophic
Community_fingerprinting
Non-photosynthetic class of cyanobacteria
Candidatus species of melainabacteria have been discovered through DNA and RNA sequence analysis of samples from soil, the human gut, and various aquatic
Vampirovibrionophyceae
Events leading to cell division
RY (September 2016). "A far-red fluorescent protein evolved from a cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–769. doi:10.1038/nmeth
Cell_cycle
Gene found in cyanobacteria
overexpressed, but also suppress circadian expression of all genes in the cyanobacterial genome. Though the KaiABC gene cluster has been found to exist only
KaiC
Genus of bacteria
PMC 12488483. PMID 40921743. Ting CS, Rocap G, King J, Chisholm S (2002). "Cyanobacterial photosynthesis in the oceans: the origins and significance of divergent
Prochlorococcus
Plants used in agriculture
Badger MR, Woodger FJ, Long BM (2008). "Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters
Genetically_modified_crops
List of plastid genomes whose DNA sequence is known
represents an independent case of the acquisition of photosynthesis by cyanobacterial endosymbiosis. (Note: the term "cyanelle" is also applied to the plastids
List_of_sequenced_plastomes
Ecological interaction between taxa
symbionts, the fungal partners cannot live on their own. The algal or cyanobacterial symbionts (e.g. Trentepohlia) can usually survive alone, so their involvement
Symbiosis
Class of enzymes
(Olejarz et al. 2021). To date, the evolution of cyanobacteria and cyanobacterial photosynthesis is commonly accepted as the primary driver of oxygen
Superoxide_dismutase
Technique in molecular biology
interactions mediated by host proteins, as demonstrated in studies of cyanobacterial PipX interactions where the self-interaction of PipX was found to be
Reporter_gene
Domain of microorganisms
when nutrients become available, such as the formation of algal and cyanobacterial blooms that often occur in lakes during the summer. Other organisms
Bacteria
Diverse group of photosynthetic organisms
at 2100 million years ago, although stromatolites, associated with cyanobacterial biofilms, appear as early as 3500 million years ago in the fossil record
Algae
Aquatic, unicellular protists with two flagella
Inaba K, et al. (August 2019). "Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host"
Dinoflagellate
Change in the heritable traits of populations
functioning, or have no effect. About half of the mutations in the coding regions of protein-coding genes are deleterious—the other half are neutral. A small percentage
Evolution
Species of bacterium
Johansen, J.R. (2014). "Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) using a polyphasic approach" (PDF). Preslia. 86: 295–335. Janson
Trichodesmium_thiebautii
Class of chemical compounds
from cyanobacteria, and close to 30% of all cyanobacterial strains are thought to contain cyanobacterial gene clusters. However, while thus far all cyanobactins
Ribosomally synthesized and post-translationally modified peptides
Ribosomally_synthesized_and_post-translationally_modified_peptides
Independent. 7 October 2024. Rezaie, Maryam; Choi, Seokheun (2024). "Cyanobacterial Artificial Plants for Enhanced Indoor Carbon Capture and Utilization"
2024_in_science
Microorganisms able to reduce elemental sulfur to hydrogen sulfide
nonmotile, non-sporeforming. Obligately anaerobic, moderate thermophilic, they generally occur in warm sediments and in thermally heated cyanobacterial or bacterial
Sulfur-reducing_bacteria
Organism belonging to kingdom Fungi
Edwards D, Axe L (2013). "The earliest records of internally stratified cyanobacterial and algal lichens from the Lower Devonian of the Welsh Borderland".
Fungus
Order of fungi
(Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes". Mycologia. 98 (6): 1088–1103. doi:10.1080/15572536.2006
Baeomycetales
Protein that exhibits bright green fluorescence when exposed to ultraviolet light
et al. (September 2016). "A far-red fluorescent protein evolved from a cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–9. doi:10.1038/nmeth
Green_fluorescent_protein
Doolittle WF, Papke RT (September 2006). "Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events". Genome
Inferring horizontal gene transfer
Inferring_horizontal_gene_transfer
Genus of bacteria
(1 March 2009). "Nomenclatural validation of the genetically revised cyanobacterial genus Dolichospermum (RALFS ex BORNET et FLAHAULT) comb. nova". Fottea
Anabaena
Marine consumer-resource system
could drive marine food web collapse through altered trophic flows and cyanobacterial proliferation". PLOS Biology. 16 (1) e2003446. doi:10.1371/journal.pbio
Marine_food_web
Species of bacterium
metabolism, C. aggregans rely on organic substrates excreted from these cyanobacterial neighbors to obtain carbon for biosynthesis. To occupy these hot springs
Chloroflexus_aggregans
Class of enzymes
regulated by different Non-coding RNAs: The sRNA NsiR4 interacts with the 5'UTR of the mRNA of the GS inactivating factor IF7 (gifA mRNA) and reduces its expression
Glutamine_synthetase
argyrosperma (Silver-Seed Gourd) Reveals Faster Rates of Protein-Coding Gene and Long Noncoding RNA Turnover and Neofunctionalization within Cucurbita". Molecular
List of sequenced plant genomes
List_of_sequenced_plant_genomes
Any life form too small for the naked human eye to see that lives in a marine environment
some eukaryotes that already contained mitochondria also engulfed cyanobacterial-like organisms. This led to the formation of chloroplasts in algae and
Marine_microorganisms
Protein-coding gene in Drosophila melanogaster
However, in vitro experiments showcasing the phosphorylation of the cyanobacterial protein KaiC demonstrated that rhythmic oscillations could persist even
Doubletime_(gene)
Organisms that live in salt water
evolving into either mitochondria or hydrogenosomes. Another engulfment of cyanobacterial-like organisms led to the formation of chloroplasts in algae and plants
Marine_life
Marine synthesis of organic compounds
Solo-Gabriele H, Gerwick WH, eds. (2 September 2011). "Cyanobacteria and cyanobacterial toxins". Oceans and Human Health: Risks and Remedies from the Seas.
Marine_primary_production
Protists that live in saltwater or brackish water
recent years the high throughput sequencing (HTS) of environmental DNA or RNA has transformed understanding of microbial diversity and evolution, as well
Marine_protists
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CYANOBACTERIAL NON-CODING-RNA
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CYANOBACTERIAL NON-CODING-RNA
CYANOBACTERIAL NON-CODING-RNA
CYANOBACTERIAL NON-CODING-RNA
CYANOBACTERIAL NON-CODING-RNA
CYANOBACTERIAL NON-CODING-RNA
CYANOBACTERIAL NON-CODING-RNA
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