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Jpred v.4 is the latest version of the JPred Protein Secondary Structure Prediction Server which provides predictions based on the Jnet algorithm, one
Jpred
Technique in computer programming
Experimental implementations have been created for Common LISP, and for Java (JPred). It allows open extension of previously declared methods at a fine-grained
Predicate_dispatch
inference Many implementations Basic GOR GOR V[link removed] 2002 (GOR V) Jpred Multiple Neural network assignment from PSI-BLAST and HMMER profiles. Predicts
List of protein secondary structure prediction programs
List_of_protein_secondary_structure_prediction_programs
to many external web services to import data and perform calculations. Jpred "Release History". Archived from the original on 2019-03-06. Retrieved 2016-05-30
Jalview
Type of biological prediction
conformation required for the presence of a complete beta sheet. PSIPRED and JPRED are some of the most known programs based on neural networks for protein
Protein_structure_prediction
freeware No ? www.ivistmsa.com Jalview Secondary structure prediction via JPred 4 Clustal O, Clustal, GLprobs, MSAprobs, MUSCLE, MAFFT, Probcons, TCoffee
List of alignment visualization software
List_of_alignment_visualization_software
Computational biologist
integration and visualisation workbench on multiple sequence alignments), JPred (protein secondary structure prediction), STAMP (alignment of multiple protein
Geoff_Barton_(scientist)
Protein family
in bony vertebrates, and neither its structure nor function is unknown. Jpred predicts the human version of the section to be mostly coils; it also suggests
DM_domain
Protein
Server. Biogem. Retrieved 5 December 2023. JPred 4: A Protein Secondary Structure Prediction Server. JPred 4. Retrieved 5 December 2023. Predict Protein
C11orf91
British biophysicist
and the first online consensus secondary structure prediction algorithm JPred. He supported the resolution of the mouse, dog and monodelphis genomes and
James_Cuff
Protein
pl?page=/NPSA/npsa_sopma.html Jpred4 http://www.compbio.dundee.ac.uk/jpred/ Ali2D https://omictools.com/ali2d-tool Phyre2 http://www.sbg.bio.ic.ac
TMEM125
Human protein
2026-06-07. "Six-Frame Translation". www.bioline.com. Retrieved 2026-06-07. "Jpred job jp_6VX6dfa completed". www.compbio.dundee.ac.uk. Retrieved 2026-06-07
Iglv6-57
Protein present in humans
Secondary Structure Prediction Server". www.biogem.org. Retrieved 2020-05-05. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
TMEM275
Genomics. 7 (1) 13. doi:10.1186/1479-7364-7-13. PMC 3658946. PMID 23676014. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
Kelch-like_protein_36
Human gene
Retrieved 2025-12-12. "ScanProsite". prosite.expasy.org. Retrieved 2025-12-12. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
ZBED11
Protein-coding gene in the species Homo sapiens
Secondary Structure Prediction Server". www.biogem.org. Retrieved 2019-04-22. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
TEDC2
Human gene
2018-04-30. "NetPhos 3.1 Server". www.cbs.dtu.dk. Retrieved 2018-04-30. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
CFAP20DC
Human C4orf19 gene
Multiple Sequence Alignment < EMBL-EBI". www.ebi.ac.uk. Retrieved 2021-12-17. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
PGCKA1
Human gene
gov. Retrieved 2025-12-12. "InterPro". InterPro. Retrieved 2025-12-12. "JPred: A Protein Secondary Structure Prediction Server". www.compbio.dundee.ac
TMEM62
Method used to investigate protein structure
correctly in the secondary structure states, namely helix, strand, and coil. Jpred Protein design Protein function prediction De novo protein structure prediction
PSIPRED
Protein found in humans
structure for C9orf50 was predicted by using analysis from Gor, COILS, CFSSP, JPRED, and SOPMA.[1],[2],[3],[4],[5] Helix indicated by green cylinders, beta
C9orf50
Human protein-coding gene
motifs in CDV3. The following programs were used to develop this figure: JPred, CFSSP, and GOR4. The majority of the CDV3 structure is hypothesized to
CDV3_(gene)
Protein-coding gene in humans
secondary structure prediction". npsa-prabi.ibcp.fr. Retrieved 2019-05-05. "JPred: A Protein Secondary Structure Prediction Server". compbio.dundee.ac.uk
C16orf78
Novel human gene
"Bioinformatics Toolkit". toolkit.tuebingen.mpg.de. Retrieved 2023-12-07. "JPred Secondary Structure Prediction". www.jalview.org. Retrieved 2023-12-07.
ARMH1
Protein-coding gene in the species Homo sapiens
server". 2019-05-04. "A Protein Secondary Structure Prediction Server". Jpred 4 incorporating Jnet. 2019-05-04. "SOPMA SECONDARY STRUCTURE PREDICTION
C22orf23
Ensembl genome browser 96". uswest.ensembl.org. Retrieved 27 April 2019. "JPRED". "NPS@ : GOR4 secondary structure prediction". npsa-prabi.ibcp.fr. Retrieved
Transmembrane_protein_151A
travel, tourism, insurance
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