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Microbial community assemblage and activity
A microbiome (from Ancient Greek μικρός (mikrós) 'small' and βίος (bíos) 'life') is the community of microorganisms that can usually be found living together
Microbiome
Microorganisms in or on human skin and biofluids
The human microbiome is the aggregate of all microbiota that reside on or within human tissues and biofluids along with the corresponding anatomical sites
Human_microbiome
Shrub growing in brackish water
maize and soybean. There is less information on the microbiomes of tree species. Plant microbiomes are determined by plant-related factors (e.g., genotype
Mangrove
Community of microorganisms in the gut
Gut microbiota, gut microbiome, or gut flora are the microorganisms, including bacteria, archaea, fungi, and viruses, that live in the digestive tracts
Gut_microbiota
Marine invertebrates of the subphylum Anthozoa
their tissue and skeleton microbiomes. The coral skeleton, which represents the most diverse of the three coral microbiomes, showed the strongest evidence
Coral
Marine flowering plants
sediments will differ from that in a dynamic water column. Most seagrass microbiome studies use Zostera marina as the target species due to its wide distribution
Seagrass
Community of microorganisms
microbiome describes either the collective genomes of the microbes that reside in an ecological niche or else the microbes themselves. The microbiome
Microbiota
Community of microorganisms found in or around sponges
Sponge microbiomes are diverse communities of microorganisms in symbiotic association with marine sponges as their hosts. These microorganisms include
Sponge_microbiomes
Assembly of microorganisms near plants
The plant microbiome, also known as the phytomicrobiome, plays roles in plant health and productivity and has received significant attention in recent
Plant_microbiome
Solid or semisolid remains of undigested food
like clay. Feces plays a key role in representing the microbiome within the gut. The gut microbiome is a very important indicator and mediator of the health
Feces
Former research initiative
The Human Microbiome Project (HMP) was a United States National Institutes of Health (NIH) research initiative to improve understanding of the microbiota
Human_Microbiome_Project
Plateau on Pacific coast of South America
Program. On 21 February 2023, scientists reported the findings of a "dark microbiome" of unfamiliar microorganisms in the Atacama Desert. In June 1991, Antofagasta
Atacama_Desert
Hypothesized microbiome in the brain
The brain microbiome is a hypothesized microbiome of bacteria and other flora that may exist in the brain. Its existence is speculative. Traditionally
Brain_microbiome
are associated with many microbiomes. This article lists some of the species recognized as belonging to the human microbiome and focuses on the oral,
List_of_human_microbiota
Biochemical signaling between the gastrointestinal tract and the central nervous system
released by the gut microbiome can influence brain development, starting from birth. A review from 2015 states that the gut microbiome influences the CNS
Gut–brain_axis
Crop Microbiome Cryobank is a scientific repository and data resource that aims to improve soil and crop health by focusing on plant microbiomes. The
UK_Crop_Microbiome_Cryobank
Changes in microbiota leading to disease
(also called dysbacteriosis) is characterized by a disruption to the microbiome resulting in an imbalance in the microbiota, changes in their functional
Dysbiosis
Species of bacteria
anaerobic Gram negative rod bacteria commonly found in the human gut microbiome and isolated from feces. P. vulgatus has medical relevance and has been
Phocaeicola_vulgatus
urinary microbiome (urobiome), as well as the genital microbiome, and is a subset of the human microbiome. The study of the genitourinary microbiome is young;
Genitourinary_microbiome
Microscopic living organism
supports many microorganisms known as the root microbiome. These microorganisms in the root microbiome are able to interact with each other and surrounding
Microorganism
The placental microbiome is the nonpathogenic, commensal bacteria claimed to be present in a healthy human placenta and is distinct from bacteria that
Placental_microbiome
Biological contents of human saliva
salivary microbiome consists of the nonpathogenic, commensal bacteria present in the healthy human salivary glands. It differs from the oral microbiome which
Salivary_microbiome
Israeli microbiologist (born 1974)
His research focuses on microbial ecology and the evolution of the gut microbiome, particularly in ruminants . He is a recipient of the Michael Bruno Memorial
Itzhak_Mizrahi
The uterine microbiome refers to the community of commensal, nonpathogenic microorganisms—including bacteria, viruses, and yeasts/fungi—present in a healthy
Uterine_microbiome
Microorganisms living in the fruit fly
comprehensive toolkit available for research in Drosophila, analysis of its microbiome could enhance our understanding of similar processes in other types of
Microbiome in the Drosophila gut
Microbiome_in_the_Drosophila_gut
Microbe community of plant roots
The root microbiome (also called rhizosphere microbiome) is the dynamic community of microorganisms associated with plant roots. Because they are rich
Root_microbiome
Host and associated species living as a discrete ecological unit
since the original formulations. Holobionts include the host, virome, microbiome, and any other organisms which contribute in some way to the functioning
Holobiont
The poultry microbiome is an understudied, yet extremely impactful part of the poultry industry. Poultry is defined as any avian species used for production
Poultry_microbiome
call (proposal n. 242860, titled "PharmacoMICROBIOMICS, study of the microbiome determinants of the different drug responses between individuals"), and
Pharmacomicrobiomics
Marine community of plankton and microbes
A phytoplankton microbiome is the community of microorganisms—mainly bacteria, but also including fungi and viruses—that live in association with phytoplankton
Phytoplankton_microbiome
Community of microorganisms found in or around specific marine environments
interactions between the animal host and a more multi-member microbiome. The potential for microbiomes to influence the health, physiology, behavior, and ecology
Marine_microbiome
Dutch microbiologist (born 1966)
improper research conduct. Bik is the founder of Microbiome Digest, a blog with daily updates on microbiome research, and the Science Integrity Digest blog
Elisabeth_Bik
Communities of microorganisms that live in human constructed environments
Microbiomes of the built environment is a field of inquiry into the communities of microorganisms that live in human constructed environments like houses
Microbiomes of the built environment
Microbiomes_of_the_built_environment
Community of microorganisms in human milk
microbial populations found within the human body which constitute the human microbiome. The microbiota in human milk serves as a potential source of commensal
Human_milk_microbiome
Medical procedure
The Human Microbiome Project (HMP), completed in 2012, laid the foundation for further investigation into the role the microbiome plays in overall health
Vaginal_seeding
Microscopic algae
synergy Microbiome microbiota holobiont Quorum sensing Host microbe interactions in Caenorhabditis elegans Plants Plant microbiome Root microbiome Seagrass
Microalgae
Microbiome multi-omics bioinformatics tool
science platform, originally developed for analysis of high-throughput microbiome marker gene (e.g., 16S or 18S rRNA genes) amplicon sequencing data. There
QIIME
Study of all proteins in an environment
experimental approaches to study all proteins in microbial communities and microbiomes from environmental sources. Metaproteomics is used to classify experiments
Metaproteomics
Group of communities of microorganisms that reside within whales
The cetacean microbiome is the group of communities of microorganisms that reside within whales. Microbiomes play an important role in individual health
Cetacean_microbiome
Microbibal ecological classification
A pathobiont is an organism that is native to the host's microbiome that under certain environmental or genetic changes can become pathogenic and induce
Pathobiont
First compartment of ruminant stomach
energy for ruminants and are critical to the health of the rumen and its microbiome. Lipids, lignin, minerals, and vitamins play a less prominent role in
Rumen
Undersea unicellular organisms
and extremely acidic conditions in a shallow hydrothermal ecosystem". Microbiome. 11 (1): 270. doi:10.1186/s40168-023-01712-w. ISSN 2049-2618. PMC 10696704
Hydrothermal vent microbial communities
Hydrothermal_vent_microbial_communities
Species of jellyfish
precursors to hormones involved in strobilation. The presence of a native microbiome in the polyp stage is also essential for successful asexual reproduction
Aurelia_aurita
research on plant microbiomes have dramatically furthered knowledge on ecological functions and key roles of the plant microbiome in supporting plant
Plant_holobiont
A microbiome-wide association study (MWAS), otherwise known as a metagenome-wide association study (MGWAS), is a statistical methodology used to examine
Microbiome-wide association study
Microbiome-wide_association_study
Human microbiome of the eye
The ocular surface microbiome or ocular microbiome refers to the microbiota, including bacteria and fungi, that live on the eye, mainly the conjunctiva
Ocular_surface_microbiome
American businessman and microbiome researcher
Leach) is an American businessman and microbiome researcher from Texas. He is known for his work on the gut microbiome of the Hadza hunter gatherers, founding
Jeff_D._Leach
Plant surfaces as habitats for microorganisms
and indirectly influence microbiome composition. Rain and wind also cause temporal variation in the phyllosphere microbiome. The phyllosphere includes
Phyllosphere
microbes are destroyed by hydrochloric acid. Recent approaches in the microbiome studies suggest that different niches in the oral cavity such as tooth
Oral_microbiology
Total collection of viruses in and on the human body
frequently. Unlike the roughly 40 trillion bacteria in a typical human microbiome, an estimate of the number of viral particles in a healthy adult human
Human_virome
American gastroenterologist
and advocate for the exploration of the relationship between the gut microbiome, dietary fiber, and plant-based nutrition. He is also an Adjunct Assistant
Will_Bulsiewicz
British-American microbial ecologist
American microbial ecologist. She is currently director of the Department of Microbiome Science at the Max Planck Institute for Biology, Tübingen, Germany. Ley
Ruth_E._Ley
Microbiota that reside on the skin
bacteria it is an excellent part of the skin microbiome to study. The navel, or umbilicus is a moist microbiome of the body (with high humidity and temperatures)
Skin_flora
Region of soil or substrate comprising the root microbiome
root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microorganisms
Rhizosphere
Phyletic symbiosis in microbiome research
field of microbiome research, a group of species is said to show a phylosymbiotic signal if the degree of similarity between the species' microbiomes recapitulates
Phylosymbiosis
Pest of all beans, kudzu, other legumes
beggs > bnymphs > badults. Populations harboring "M. punctatissima"-type microbiomes (Japan; North American invasive) are able to infest Glycine max (soybean)
Megacopta_cribraria
Jamaican-born American microbiologist
Nelson is a Jamaican-born American microbiologist (specializing in human microbiome research) who was formerly president of the J. Craig Venter Institute
Karen_E._Nelson
Treatment for a wide range of bacteria
A broad-spectrum antibiotic is an antibiotic that acts on the two major bacterial groups, Gram-positive and Gram-negative, or any antibiotic that acts
Broad-spectrum_antibiotic
Nonprofit organization
human microbiome. They partner with leading researchers, clinicians and innovators to advance and ensure access to novel and affordable microbiome therapeutics
OpenBiome
American scientist
the human gut. Jansson is part of the Phenotypic Response of the Soil Microbiome to Environmental Perturbations Science Focus Area, and is a Fellow of
Janet_Jansson
Female sex organ in mammals
mutualistic organisms are present in the uterus and form the uterine microbiome. The uterus is primarily supported by the pelvic diaphragm, perineal body
Uterus
Species of baboon
composition of their gut microbiome. One group of researchers found that social group membership and interaction rates affected baboon microbiome composition, which
Yellow_baboon
Condition involving social and behavioral differences
Margolis KG (June 2018). "Serotonin as a link between the gut-brain-microbiome axis in autism spectrum disorders". Pharmacological Research (Review)
Autism
American biologist (born 1947)
University School of Medicine. He is considered to be the "father" of human microbiome research. His studies of healthy and undernourished children living in
Jeffrey_I._Gordon
Method of data analysis
analysis has applications in many fields such as population genetics, microbiome studies, and atmospheric science. When performing PCA, the first principal
Principal_component_analysis
microbiota Microbiome Human microbiome List of human microbiota Wikisource:1911 Encyclopædia Britannica/Linnaeus Berge, Gabriela (2020), "Microbiome definition
Flora_(microbiology)
Milk produced by the mammary glands in the breast of a female human
contributing to the healthy development of the infant's immune system and gut microbiome. The World Health Organization (WHO) and UNICEF recommend exclusive breastfeeding
Breast_milk
Microorganisms present in the vagina
Vaginal flora, vaginal microbiota or vaginal microbiome are the microorganisms that colonize the vagina. They were discovered by the German gynecologist
Vaginal_flora
Any life form too small for the naked human eye to see that lives in a marine environment
in the ocean. Taken together they form the marine microbiome. Over billions of years this microbiome has evolved many life styles and adaptations and come
Marine_microorganisms
Irish neurobiologist
Irish stress neurobiologist who has made key discoveries on how the gut microbiome influences the brain. He is a nephew of the American politician John F
John_Cryan_(neurobiologist)
Endosymbiotic bacterium or fungus
considered for their role in plant growth promotion as part of the core microbiome of a plant. Endophytes were first described by the German botanist Johann
Endophyte
Israeli immunologist
Institute for Advanced Research, and a partner at Novo Nordisk Foundation Microbiome Health Initiative. Elinav earned a M.D. from the Hebrew University in
Eran_Elinav
Species of bacterium
flagellate which occur in the rumen content of sheep and cows and in the gut microbiome of humans. It is suggested that Eubacterium rectale is a synonym of A
Agathobacter_rectalis
Algerian immunologist
regulation to microbes. Belkaid currently serves as the director of the NIAID Microbiome program. On March 29, 2023, she was appointed as President of the Pasteur
Yasmine_Belkaid
Process of transplantation of fecal bacteria from a healthy individual into a recipient
no single culprit has yet been identified. However, analysis of gut microbiome and metabolome changes after FMT as treatment for ulcerative colitis has
Fecal_microbiota_transplant
British epidemiologist
science writer, working on the relationship between nutrition, the gut microbiome, and health. He argues against low-fat diets and fad diets, and instead
Tim_Spector
Genus of bacteria
laboratory reagents, which can lead to their being misrepresented in microbiome data. Microbacterium comprises the following species: M. aerolatum Zlamala
Microbacterium
belonging to the family Rikenellaceae. Commonly found in the human gut microbiome, it is non-spore forming and has a size of about 0.8x1.7μm. This species
Alistipes_communis
Group of bacteria affecting plant growth
faeces bacteria. endophyte endosymbiont symbiogenesis microbiota plant microbiome actinorrhiza Mycorrhiza Arbuscular mycorrhiza Common symbiosis signaling
Rhizobacteria
The evolution of the human oral microbiome is the study of microorganisms in the oral cavity and how they have adapted over time. There are recent advancements
Evolution of the human oral microbiome
Evolution_of_the_human_oral_microbiome
Greek-American bioscientist (born 1963)
information processing, bioinformatics, microbiology, metagenomics and microbiome data science. He is a senior staff scientist at the Berkeley National
Nikos_Kyrpides
Phylum of Gram-negative bacteria
species Brackish, estuary waters Microbiomes of shrimp and mollusks Human vaginal tract Potato rhizosphere microbiome Studies have suggested Pseudomonadota
Pseudomonadota
Scientific study of chemical processes involving metabolites
on Microbiomes Plant microbiomes Endosphere Phyllosphere Rhizosphere laimosphere root microbiome soil microbiome spermosphere Marine microbiomes Cetacean
Metabolomics
American microbiologist (born 1972)
was awarded a MacArthur Fellowship for his pioneering work on the human microbiome. Mazmanian's research investigates the symbiotic relationship between
Sarkis_Mazmanian
Multi-cellular organisms that have no microorganisms living in or on them
because the status of their microbial community is known. Due to lacking a microbiome, many germ-free organisms exhibit health deficits such as defects in the
Germ-free_animal
Classification of living organisms based on its gut microbiome
also indicate that long-term diet is strongly associated with the gut microbiome composition—those who eat plenty of protein and animal fats typical of
Enterotype
American microbiologist
developing zebrafish as a model organism to study the effects of the microbiome on animal development and health. In 2012, she co-founded the Microbial
Karen_Guillemin
Species of the bacteria
This species was first discovered in 2021 in a study to create a Gut Microbiome Biobank. It was discovered in fecal samples from 239 healthy Chinese volunteers
Simiaoa_sunii
British evolutionary microbiologist
balance of competition and cooperation in biofilms and in the human gut microbiome. He is Chair of Microbiology at the Sir William Dunn School of Pathology
Kevin_Foster_(biologist)
Earth's southernmost continent
et al. (10 May 2019). Pierre Amato (ed.). "Source Environments of the Microbiome in Perennially Ice-Covered Lake Untersee, Antarctica". Frontiers in Microbiology
Antarctica
American microbiologist (born c. 1981)
models and human cohorts to study the mechanisms through which the gut microbiome influences nutrition and pharmacology. Turnbaugh received a B.A. in Biochemistry
Peter_J._Turnbaugh
Pink-coloured lake in Western Australia
be due to the presence of the organism Dunaliella salina. The Extreme Microbiome Project, part of the Association of Biomolecular Resource Facilities (ABRF)
Lake_Hillier
clinical trials. It also partnered with MyMicrobiome to certify all of its skincare products as microbiome-supporting. Codex launched its first skincare
Codex_Labs
Species of honey bee
members. Honey bees acquire their microbiome socially. Beginning in the larval stage, honey bees lack a gut microbiome, though they may acquire some species
Western_honey_bee
Danish physician and professor (born 1945)
research spans diabetes care, endocrinology, human genomics and the gut microbiome. He is known for leading the Steno-2 trial, which demonstrated durable
Oluf_Borbye_Pedersen
Cancer of the colon or rectum
Collectively, these findings support the view that disturbances in the gut microbiome can influence colorectal carcinogenesis through multiple mechanisms. Colorectal
Colorectal_cancer
Type of tonsil
2023. Johnston, James Jordan and Richard Douglas. 2018. "Adenotonsillar Microbiome: An Update." Postgraduate Medical Journal 94 (1113) (07): 398. Darrow
Adenoid
Species of bacterium
bacteria. It has been identified as being part of the uterine microbiome and placental microbiome. "Neisseria polysaccharea - Gonorrhea - STD Information from
Neisseria_polysaccharea
Species of bacterium
cancer. D. longicatena is known to be associated with the altered gut microbiome in patients with dystonia, a complex neurological movement disorder, where
Dorea_longicatena
Suffix in biology
is the study of microbiome dynamics, function, and structure. This area of study employs several techniques to study the microbiome in its host environment:
Omics
MICROBIOME
MICROBIOME
MICROBIOME
MICROBIOME
Girl/Female
Tamil
Srishtii | à®·à¯à®°à¯€à®·à¯à®Ÿà®¿
World
Boy/Male
German
Desire
Boy/Male
Muslim/Islamic
Praised
Surname or Lastname
Altered spelling of French Minot, written thus to preserve the final -t, which is pronounced in Canadian French.English
Altered spelling of French Minot, written thus to preserve the final -t, which is pronounced in Canadian French.English : variant of Minett.
Girl/Female
Arabic American English
Happy.
Girl/Female
Latin Greek English
Defender of man.
Surname or Lastname
English (mainly Lancashire)
English (mainly Lancashire) : topographic name from Old English gors(t) ‘gorse’, or a habitational name from some minor place named with this word.Slovenian (Gorše) : shortened form of the personal name Gregor, Latin Gregorius.Slovenian (Gorše) : topographic name from a derivative of gora ‘mountain’, ‘hill planted with vines’, ‘wood in a hill country’ (see Gornik).
Girl/Female
Hindu, Indian
Simple
Boy/Male
Arabic, Australian, French, German, Hebrew, Muslim, Sindhi
Rising; Ascending; Going Up
Boy/Male
Hindu
Fair complexioned, White, Pure
MICROBIOME
MICROBIOME
MICROBIOME
MICROBIOME
MICROBIOME