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Attractive interaction between two molecules
Molecular binding is an attractive interaction between two molecules that results in a stable association in which the molecules are in close proximity
Molecular_binding
Molecular mechanism
Cooperative binding occurs in molecular binding systems containing more than one type, or species, of molecule and in which one of the partners is not
Cooperative_binding
Prediction method in molecular modeling
produced. Molecular docking is one of the most frequently used methods in structure-based drug design, due to its ability to predict the binding-conformation
Docking_(molecular)
Human glycoprotein that binds to androgens and estrogens
Sex hormone-binding globulin (SHBG) or sex steroid-binding globulin (SSBG) is a glycoprotein that binds to androgens and estrogens. When produced by the
Sex_hormone–binding_globulin
Topics referred to by the same term
up binding in Wiktionary, the free dictionary. Binding generally means tying or associating multiple things together. Binding may refer to: Binding (woodworking)
Binding
Substance that forms a complex with a biomolecule
binding partner is a function of charge, hydrophobicity, and molecular structure. Binding occurs by intermolecular forces, such as ionic bonds, hydrogen
Ligand_(biochemistry)
Biological process
differs from simple diffusion in several ways: The transport relies on molecular binding between the cargo and the membrane-embedded channel or carrier protein
Facilitated_diffusion
Class of chemical compounds
target to an E3 ubiquitin ligase, molecular glues induce or enhance PPIs between the ligase and the substrate by binding at existing or latent interaction
Molecular_glue
Molecular-scale artificial or biological device
of an artificial molecular machine (AMM) was reported in 1994, featuring a rotaxane with a ring and two different possible binding sites. In 2016 the
Molecular_machine
End-to-end chemical orientation of a single strand of nucleic acid
Directionality, in molecular biology and biochemistry, is the end-to-end chemical orientation of a single strand of nucleic acid. In a single strand of
Directionality (molecular biology)
Directionality_(molecular_biology)
Low-molecular-weight chromium-binding substance (LMWCr; also known as chromodulin) is an oligopeptide that seems to transport chromium in the body. It
Low-molecular-weight chromium-binding substance
Low-molecular-weight_chromium-binding_substance
Class of proteins
Penicillin-binding proteins (PBP) are a group of proteins that are characterized by their affinity for and binding of penicillin. They are a normal constituent
Penicillin-binding_proteins
flexibility can be advantageous in applications requiring adaptive binding, such as selective molecular capture under varying conditions. Some systems even form
Organic_molecular_cages
Molecule-specific coordinate bonding area in biological systems
and molecular biology, a binding site is a region on a macromolecule such as a protein that binds to another molecule with specificity. The binding partner
Binding_site
Mammalian protein found in Homo sapiens
Mannose-binding lectin (MBL), also called mannan-binding lectin or mannan-binding protein (MBP), is a lectin that is instrumental in innate immunity as
Mannan-binding_lectin
Protein that regulates the rate of DNA transcription
In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription of genetic
Transcription_factor
Polymer with synthetic molecular receptor
interactions by quantum mechanical molecular modelling, providing more precise calculations of binding energies. Molecular dynamics has also been applied
Molecularly_imprinted_polymer
Model of electronic band structures of solids
of conductive polymers, organic semiconductors and molecular electronics, for example, tight-binding-like models are applied in which the role of the atoms
Tight_binding
Branch of biology that studies biological systems at the molecular level
Molecular biology is a branch of biology that seeks to understand the molecular structures and chemical processes that are the basis of biological activity
Molecular_biology
Numeric method in quantum chemistry
molecular systems. Although the exchange energy becomes elusive at large internuclear systems, it is of prominent importance in theories of molecular
Holstein–Herring_method
Protein-coding gene in the species Homo sapiens
peptide binding activity (called class II mutations) both fail to fold carboxypeptidase Y (CPY) at non-permissive temperature. As an ER molecular chaperone
Binding immunoglobulin protein
Binding_immunoglobulin_protein
Use of classical mechanics to model molecular systems
physical chemistry and classical mechanics, molecular mechanics is a computational method used to model molecular systems. The Born–Oppenheimer approximation
Molecular_mechanics
Computer simulations to discover and understand chemical properties
positions of critical amino acids involved in ligand binding. Carlson et al. implemented molecular dynamics simulations to identify compounds that complement
Molecular_dynamics
Oligonucleotide or peptide molecules that bind specific targets
aptamers are small, with a molecular weight of 6-30 kDa, in contrast to the 150 kDa size of antibodies, and contain one binding site rather than the two
Aptamer
Type of protein
Maltose-binding protein (MBP) is a part of the maltose/maltodextrin system of Escherichia coli, which is responsible for the uptake and efficient catabolism
Maltose-binding_protein
Protein-coding gene in the species Homo sapiens
The myosin-binding protein C, cardiac-type is a protein that in humans is encoded by the MYBPC3 gene. This isoform is expressed exclusively in heart muscle
Myosin binding protein C, cardiac
Myosin_binding_protein_C,_cardiac
Metalloprotein that binds with oxygen
around 35% of the total weight (including water). Hemoglobin has an oxygen-binding capacity of 1.34 mL of O2 per gram, which increases the total blood oxygen
Hemoglobin
Molecular Partners AG is a clinical-stage biopharmaceutical company based in Zürich, Switzerland. The company is developing a new class of potent, specific
Molecular_Partners
Protein-coding gene in the species Homo sapiens
(June 2002). "Paip1 interacts with poly(A) binding protein through two independent binding motifs". Molecular and Cellular Biology. 22 (11): 3769–82. doi:10
PABPC1
Data from molecular docking can be used to construct new compounds that are more or less efficient at binding to a specific molecule. Molecular docking
Molecular Operating Environment
Molecular_Operating_Environment
Professor of Chemistry (1940–2018)
1613942. ISSN 0021-9606. Basch, Harold; Ratner, Mark A. (2004). "Molecular binding at gold transport interfaces. III. Field dependence of electronic
Harold_Basch
Method in quantum chemistry
combination of OM2 and MRCI is an important tool for excited state molecular dynamics. Tight-binding methods, e.g. a large family of methods known as DFTB, are
Semi-empirical quantum chemistry method
Semi-empirical_quantum_chemistry_method
Region of a protein which can bind to biomolecules with chemical specificity
In molecular biology, binding domain is a protein domain which binds to a specific atom or molecule, such as calcium or DNA. A protein domain is a part
Binding_domain
Mammalian protein found in Homo sapiens
Yamamori I, Miura Y, Oiso Y, et al. (June 1991). "Molecular cloning and primary structure of rat thyroxine-binding globulin". Biochemistry. 30 (22): 5406–5411
Thyroxine-binding_globulin
Sort of RNA-binding protein in molecular genetics
In molecular genetics, a repressor is a DNA- or RNA-binding protein that inhibits the expression of one or more genes by binding to the operator or associated
Repressor
Proteins that bind with DNA
DNA-binding proteins are proteins that have DNA-binding domains and thus have a specific or general affinity for single- or double-stranded DNA. Sequence-specific
DNA-binding_protein
as it will no longer possess a net surface charge (a requisite for molecular binding to ion exchange resins). Chromatofocusing is a powerful purification
Chromatofocusing
Branch of neuroscience
Molecular neuroscience is a branch of neuroscience that observes concepts in molecular biology applied to the nervous systems of animals. The scope of
Molecular_neuroscience
Protein found in humans
Transactive response DNA binding protein 43 kDa (TAR DNA-binding protein 43 or TDP-43) is a protein that in humans is encoded by the TARDBP gene. TDP-43
TAR_DNA-binding_protein_43
Protein molecule receiving signals for a cell
inhibitory neurotransmitter, inhibits electrical activity of neurons by binding to GABAA receptors. There are three main ways the action of the receptor
Receptor_(biochemistry)
Soluble proteins secreted by auxiliary cells surrounding olfactory receptor neurons
Odorant-binding proteins (OBPs) are small (10 to 30 kDa) soluble proteins secreted by auxiliary cells surrounding olfactory receptor neurons, including
Odorant-binding_protein
Biochemical research competition
discovery Lead compound Molecular binding Molecular recognition Molecular dynamics Molecular mechanics Water model CASP CAPRI BindingDB Geballe, Matthew T
SAMPL_Challenge
Energy required to separate particles
In physics and chemistry, binding energy is the smallest amount of energy required to remove a particle from a system of particles or to disassemble a
Binding_energy
Branch of chemistry
crystals, and is important to crystal engineering. Molecular recognition is the specific binding of a guest molecule to a complementary host molecule
Supramolecular_chemistry
Mammalian protein found in humans
"The roles of androgen receptors and androgen-binding proteins in nongenomic androgen actions". Molecular Endocrinology. 16 (10): 2181–7. doi:10.1210/me
Androgen_receptor
Protein(s) forming a major part of an organism's immune system
(January 1991). "Structure, function and properties of antibody binding sites". Journal of Molecular Biology. 217 (1): 133–51. doi:10.1016/0022-2836(91)90617-F
Antibody
Biological database of proteins
contiguous in sequence, but may come together in 3D space to define molecular binding sites or interaction surfaces. The particular diagnostic strength
PRINTS
Noncovalent molecular interaction
Dougherty, DA (1998). "From ab initio quantum mechanics to molecular neurobiology: A cation–π binding site in the nicotinic receptor". Proc. Natl. Acad. Sci
Cation–π_interaction
M.K. Binding DB: A web-accessible molecular recognition database J. Combi. Chem. High-Throughput Screen 4:719-725 (2001). BindingDB.org BindingDB tutorial
BindingDB
Protein found in humans
Retinol binding protein 4, also known as RBP4, is a transporter protein for retinol (vitamin A alcohol). RBP4 has a molecular weight of approximately
Retinol_binding_protein_4
Protein pathway in cells
measures molecular binding strength. Research shows five main results: Ubiquitin Binding Behavior: Binding to the different ubiquitin-binding domains (UBDs)
ESCRT
Biomolecule consisting of chains of amino acid residues
responsible for binding another molecule is known as the binding site and is often a depression or "pocket" on the molecular surface. This binding ability is
Protein
Protein found in humans
2009). "The RNA-binding protein Elavl1/HuR is essential for placental branching morphogenesis and embryonic development". Molecular and Cellular Biology
ELAV-like_protein_1
Mammalian protein found in Homo sapiens
PMID 31998239. "Protein Molecular Weight Calculator". www.sciencegateway.org. Retrieved 2026-06-14. "RecName: Full=Vitamin D-binding protein; Short=DBP; Short=VDB;
Vitamin_D-binding_protein
Probe which tests for biological molecules
physical and chemical changes occurring at the sensor interface—such as molecular binding events that block ion transport. Advanced designs leverage specialized
Biosensor
nanopattern of molecular binding sites on the surface of a sensor chip, termed mologram. A mologram is a coherent assembly of binding sites on a chip
Focal_molography
Rest mass of an atom in its ground state
in the nucleus, with minor contributions from the electrons and nuclear binding energy. The atomic mass of atoms, ions, or atomic nuclei is slightly less
Atomic_mass
Type of chemical bond
(December 2019). "Fast force loading disrupts molecular binding stability in human and mouse cell adhesions". Molecular & Cellular Biomechanics. 16 (3): 211–23
Catch_bond
Method for describing the electronic structure of molecules using quantum mechanics
It can be detected under very low temperature and pressure molecular beam and has binding energy of approximately 0.001 J/mol. (The helium dimer is a
Molecular_orbital_theory
Protein-coding gene in the species Homo sapiens
Protein S100-A1, also known as S100 calcium-binding protein A1 is a protein which in humans is encoded by the S100A1 gene. S100A1 is highly expressed
S100A1
Protein found in humans
substrate/inhibitors. The promiscuous binding pocket of P-gp is lined with aromatic amino acid side chains. Through Molecular Dynamic (MD) simulations, this
P-glycoprotein
Protein-coding gene in the species Homo sapiens
ATP-binding cassette sub-family A member 12 also known as ATP-binding cassette transporter 12 is a protein that in humans is encoded by the ABCA12 gene
ABCA12
Indian-American microbiologist and academic administrator
"Isolation and characterization of the gene encoding single-stranded-DNA-binding protein (SSB) from four marine Shewanella strains that differ in their
Lakshmi_Chilukuri
Biochemical analysis procedure
technology allowed researchers to analyze at the molecular level. The first successful ligand binding assay was reported in 1960 by Rosalyn Sussman Yalow
Ligand_binding_assay
Gene family
The ABC transporters, ATP synthase (ATP)-binding cassette transporters are a transport system superfamily that is one of the largest and possibly one
ABC_transporter
Blood-clotting protein
copper-binding protein ceruloplasmin. The C domains belong to the phospholipid-binding discoidin domain family, and the C2 domain mediate membrane binding.
Factor_VIII
Mammalian protein found in Homo sapiens
(25 mg/24 h). Transferrin has a molecular weight of around 80 kDa and contains two specific high-affinity Fe(III) binding sites. The affinity of transferrin
Transferrin
Invention of new medications based on knowledge of a biological target
will influence binding affinity. Molecular mechanics methods may also be used to provide semi-quantitative prediction of the binding affinity. Also,
Drug_design
Protein fold
Rossmann fold: A beta-alpha-beta fold at dinucleotide binding sites". Biochemistry and Molecular Biology Education. 43 (3): 206–9. doi:10.1002/bmb.20849
Rossmann_fold
Iron and oxygen-binding protein
Myoglobin (symbol Mb or MB) is an iron- and oxygen-binding protein found in the cardiac and skeletal muscle tissue of vertebrates in general and in almost
Myoglobin
Protein domain found in carbohydrate-active enzymes
In molecular biology, a carbohydrate-binding module (CBM) is a protein domain found in carbohydrate-active enzymes (for example glycoside hydrolases)
Carbohydrate-binding_module
Mass of a given molecule in daltons
The molecular mass (m) is the mass of a given molecule, often expressed in units of daltons (Da). Different molecules of the same compound may have different
Molecular_mass
Calcium-binding protein with low molecular weight
Parvalbumin (PV) is a calcium-binding protein with low molecular weight (typically 9–11 kDa). In humans, it is encoded by the PVALB gene. It is a member
Parvalbumin
Energy-carrying molecule in living cells
synthesis. Found in all known forms of life, it is often referred to as the "molecular unit of currency" for intracellular energy transfer. When consumed in
Adenosine_triphosphate
Analytical technique used in molecular biology
immunoblot), or Western blotting, is a widely used analytical technique in molecular biology and immunogenetics to detect specific proteins in a sample of
Western_blot
Equation used in molecular biology
Scatchard equation is an equation used in molecular biology to calculate the affinity and number of binding sites of a receptor for a ligand. It is named
Scatchard_equation
German scientist (born 1960)
scientist. He is the Director of the European Molecular Biology Laboratory (EMBL). and co-founder of the Molecular Medicine Partnership Unit (MMPU). Matthias
Matthias_Hentze
the kallikrein-kinin system. HMWK is inactive until it either adheres to binding proteins beneath an endothelium disrupted by injury, thereby initiating
High-molecular-weight kininogen
High-molecular-weight_kininogen
Protein domain which is involved in DNA binding
In molecular biology, the HMG-box (high-mobility group box) is a protein domain which is involved in DNA binding. The domain is composed of approximately
HMG-box
Protein-coding gene in the species Homo sapiens
in heart and muscle cells. TFAM is a double box High-mobility group DNA-binding and bending protein. This bending action is important for mitochondrial
TFAM
Nuclear protein that binds to CREB
CREB-binding protein, also known as CREBBP or CBP or KAT3A, (where CREB is cAMP response element-binding protein) is a coactivator encoded by the CREBBP
CREB-binding_protein
role of calcium-binding proteins in the control of transcription: structure to function" (PDF). BioEssays: News and Reviews in Molecular, Cellular and Developmental
Calcium-binding_protein
Anticoagulant medication
Low-molecular-weight heparin (LMWH) is a class of anticoagulant medications. They are used in the prevention of blood clots and, in the treatment of venous
Low-molecular-weight_heparin
Protein
Telomeric repeat-binding factor 2 is a protein that is present at telomeres throughout the cell cycle. It is also known as TERF2, TRF2, and TRBF2, and
Telomeric repeat-binding factor 2
Telomeric_repeat-binding_factor_2
are designed to contain a signalling moiety and a molecular recognition moiety (also called the binding site or a receptor). Combining both of these components
Molecular_sensor
RNA family
this attenuation. The formation of the terminator requires the trp RNA-binding attenuation protein (TRAP protein) in species of Bacillus and related bacteria
Tryptophan_operon_leader
An ATP-binding motif is a 250-residue sequence within an ATP-binding protein’s primary structure. The binding motif is associated with a protein’s structure
ATP-binding_motif
Type of proteins
proteins, also known as guanine nucleotide-binding proteins, are a family of proteins that act as molecular switches inside cells, and are involved in
G_protein
Enzyme in human blood that degrades clots and other proteins
represents the molecular basis of a subtype of hereditary angioedema with normal C1-inhibitor; the mutation creates a new lysine-binding site within kringle
Plasmin
ATP-binding protein sequence motifs
reported in ATP-binding proteins by Walker and co-workers in 1982. Of the two motifs, the A motif is the main "P-loop" responsible for binding phosphate, while
Walker_motifs
Mammalian protein found in Homo sapiens
(Jul 2000). "Histone binding protein RbAp48 interacts with a complex of CREB binding protein and phosphorylated CREB". Molecular and Cellular Biology
CREB1
Protein-coding gene in the species Homo sapiens
translation factor eIF-4 gamma and the translational repressors 4E-binding proteins". Molecular and Cellular Biology. 15 (9): 4990–4997. doi:10.1128/MCB.15.9
EIF4EBP1
Protein-coding gene in humans
FK506 binding protein 5, also known as FKBP5, is a protein which in humans is encoded by the FKBP5 gene. The protein encoded by this gene is a member
FKBP5
Protein-coding gene in the species Homo sapiens
Goodman M (June 1992). "A molecular perspective on mammalian evolution from the gene encoding interphotoreceptor retinoid binding protein, with convincing
RBP3
Family of globular proteins
members of the albumin, alpha-fetoprotein, vitamin D-binding protein multigene family". Journal of Molecular Evolution. 29 (4): 344–54. Bibcode:1989JMolE..29
Albumin
Protein-coding gene in the species Homo sapiens
and characterization of a cDNA encoding the low molecular weight insulin-like growth factor binding protein (IBP-1)". EMBO J. 7 (8): 2417–23. doi:10
IGFBP1
Chemical bond by sharing of electron pairs
exchanged. Therefore, covalent binding by quark interchange is expected to be the dominating mechanism of nuclear binding at small distance when the bound
Covalent_bond
Protein-coding gene in the species Homo sapiens
Schroeder F (Aug 1999). "Expression of fatty acid binding proteins is altered in aged mouse brain". Molecular and Cellular Biochemistry. 198 (1–2): 69–78.
FABP7
Measure of a ligand's binding energy per atom
Ligand efficiency is a measurement of the binding energy per atom of a ligand to its binding partner, such as a receptor or enzyme. Ligand efficiency is
Ligand_efficiency
Protein
acid complex: novel interactions required for binding to half-site response elements". Molecular Endocrinology. 20 (12): 3042–52. doi:10.1210/me.2005-0511
Nuclear_receptor
MOLECULAR BINDING
MOLECULAR BINDING
Biblical
fearful; binding
Biblical
Making sweet; binding together
Boy/Male
Hindu, Indian
Binding; Attach Together
Boy/Male
Muslim
Binding, Fastening
Boy/Male
Tamil
Binding, Attach together
Girl/Female
African, Bengali, Gujarati, Hindu, Indian, Kannada, Kenyan, Malayalam, Marathi, Sanskrit, Sindhi, Tamil, Telugu
Small; Atom; Black; Molecule; Seed
Male
Iranian/Persian
(Ù…â€ï®©â€Ø±) Persian name derived from Avestan Mithra, MIHR means "alliance; contract; a means of binding."
Boy/Male
Finnish, Indian, Sanskrit
Molecule; Particle; Earth; Born of Dust
Girl/Female
Biblical
Fearful, binding.
Girl/Female
Biblical
Hiding, binding.
Girl/Female
Biblical
Conclusion in pleading, binding.
Biblical
hiding, binding
Boy/Male
Muslim/Islamic
Binding Fastening
Male
Iranian/Persian
Avestan myth name of the son of Ahura Mazda, derived from the proto-Indo-Iranian word *mitra, MITHRA means "contract, covenant, oath, promise, treaty," from the root mi- "to bind," all of which seems to indicate the basic meaning "alliance; contract; a means of binding."
Boy/Male
Arabic, Muslim, Sindhi
Binding; Fastening
Biblical
conclusion in pleading; binding
Girl/Female
Biblical
Making sweet, binding together.
Surname or Lastname
English, German, and Jewish (Ashkenazic)
English, German, and Jewish (Ashkenazic) : metonymic occupational name for a maker of hoops and bands, etc., from Middle English band, bond, Middle High German, Middle Low German bant, German Band denoting something used for tying or binding: ‘hoop’, ‘metal band’, ‘fetter’, ‘shackle’.Old spelling of the Dutch cognates Bant, Bande, from Middle Dutch bant ‘band’.
MOLECULAR BINDING
MOLECULAR BINDING
Girl/Female
Indian
One who sows seeds
Girl/Female
American, British, Christian, English, German, Latin, Swedish
Blind; Form of Cecilia; Sixth
Boy/Male
Bengali, Gujarati, Hindu, Indian, Kannada, Malayalam, Marathi, Sanskrit, Telugu
Breath
Boy/Male
Hindu
Happy
Boy/Male
Bengali, Hindu, Indian, Kannada
A Season
Female
English
English name derived from the title, itself from Old French princesse, a feminine form of Prince, PRINCESS means "chief, first."
Girl/Female
Tamil
Mangalavathi | மஂகலாவதீ
Name of a Raga
Boy/Male
Celebrity, Gujarati, Hindu, Indian, Kannada, Malayalam, Marathi, Telugu
Lord of the Clan
Girl/Female
Tamil
Angle, Of noble kind
Girl/Female
Hindu
Earlier, One, Elder, East
MOLECULAR BINDING
MOLECULAR BINDING
MOLECULAR BINDING
MOLECULAR BINDING
MOLECULAR BINDING
n.
The smallest part of any substance which possesses the characteristic properties and qualities of that substance, and which can exist alone in a free state.
n.
Butane, each molecule of which has four carbon atoms.
n. pl.
Microscopic organic particles, molecular granules, powdered inorganic substances, etc., which in form, size, and grouping resemble bacteria.
n.
The molecular attraction exerted between bodies in contact. See Cohesion.
a.
Having five atoms in the molecule.
a.
Monocular.
n.
The state of consisting of molecules; the state or quality of being molecular.
a.
Of, pertaining to, or seated in, one eye; monocular.
n.
One of the very small invisible particles of which all matter is supposed to consist.
n.
A palmitate derived from three molecules of palmitic acid.
n.
One of the small particles or organic molecules of protoplasm.
a.
Pertaining to, connected with, produced by, or consisting of, molecules; as, molecular forces; molecular groups of atoms, etc.
a.
Adapted to be used with only one eye at a time; as, a monocular microscope.
a.
Having only one eye; with one eye only; as, monocular vision.
n.
A group of atoms so united and combined by chemical affinity that they form a complete, integrated whole, being the smallest portion of any particular compound that can exist in a free state; as, a molecule of water consists of two atoms of hydrogen and one of oxygen. Cf. Atom.
n.
An imbibing or reception by molecular or chemical action; as, the absorption of light, heat, electricity, etc.
n.
A minute particle; an atom; a molecule.
adv.
With molecules; in the manner of molecules.
a.
Between molecules; situated, or acting, between the molecules of bodies.
a.
Having six atoms in the molecule.