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Molecular biology technique to type organisms
Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci, using DNA sequences of internal fragments of multiple
Multilocus_sequence_typing
Species of bacterium
clinical cases of infection in either adults or infants. However multilocus sequence typing has shown that most neonatal meningitis cases in the past 30 years
Cronobacter_sakazakii
Small DNA molecule within a cell
et al. (2014). "In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing". Antimicrobial Agents and Chemotherapy
Plasmid
Species of bacterium that can cause meningitis
available for N. meningitidis core genome Multilocus sequence typing (cgMLST). Available at: Neisseria typing Genetic transformation is the process by
Neisseria_meningitidis
Species of bacterium
performed by multilocus sequence typing. MALDI TOF MS does currently not possess taxonomic resolution beyond the species level. Several different typing systems
Streptococcus_dysgalactiae
Species of bacterium
gel electrophoresis, multilocus enzyme electrophoresis, random amplified polymorphic DNA analysis, and multilocus sequence typing. Comparing the DNA of
Burkholderia_mallei
Microbiological classification system for genus Salmonella
pulsed field gel electrophoresis, multiple-loci VNTR analysis, multilocus sequence typing, and multiplex-PCR. These "molecular serotyping" systems actually
Kauffman–White_classification
Chronic disease caused by bacterial infection
and the cynomolgus macaque), armadillos, and red squirrels. Multilocus sequence typing of the armadillo M. leprae strains suggests that they were of
Leprosy
Species of Gram-positive bacterium
"band-based" or "sequence-based" are employed. Keeping these two methods in mind, other methods such as multilocus sequence typing (MLST), pulsed-field
Staphylococcus_aureus
Species of bacterium
however, all H. influenzae isolates can now be classified by multilocus sequence typing and other molecular methods. Most NTHi strains are considered
Haemophilus_influenzae
Genus of bacteria
biology techniques such as pulsed-field gel electrophoresis, multilocus sequence typing, and, increasingly, whole genome sequencing. Historically, salmonellae
Salmonella
; Aarestrup, Frank M.; Lund, Ole (2012-04-01). "Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria". Journal of Clinical Microbiology. 50 (4):
Diagnostic_microbiology
Species of bacterium
diversity for the different L. paracasei genomes was assessed using multilocus sequence typing (MLST) and amplified fragment length polymorphism (AFLP). MLST
Lacticaseibacillus_paracasei
Class of ectothermic tetrapods
precise dating, but the most recent molecular study, based on multilocus sequence typing, suggests a Late Carboniferous/Early Permian origin for extant
Amphibian
Species of bacterium
"First insights into the evolution of Streptococcus uberis: a multilocus sequence typing scheme that enables investigation of its population biology".
Streptococcus_uberis
Species of bacterium
"Staphylococcus pseudintermedius: Inference of Population Structure from Multilocus Sequence Typing Data". Frontiers in Microbiology. 7: 1599. doi:10.3389/fmicb.2016
Staphylococcus pseudintermedius
Staphylococcus_pseudintermedius
Species of bacterium
differentiate between S. aureus and S. argenteus, it can be done via multilocus sequence typing (MSLT). S. argenteus can cause infections in the blood stream
Staphylococcus_argenteus
Species of bacterium
antibiotics, and bacterial evolution are the cause of this issue. Multilocus Sequence Typing (MLST) and Whole Genome Sequencing (WGS) have been used to find
Clostridium_perfringens
Species of bacterium
A:1 and A:14 should both test as having the genotype A:L1. Two multilocus sequence typing schemes have been defined, an RIDIC scheme based on fragments
Pasteurella_multocida
Species of bacterium
identification of Pantoea agglomerans non-culture based methods such as Multilocus sequence typing (MLST) or Whole-Cell MALDI-TOF MS are recommended. Includes P
Pantoea_agglomerans
Species of single-celled organism
Recent attempts at a better genotyping characterisation include multilocus sequence typing based on microsatellite markers and single nucleotide polymorphisms
Cyclospora_cayetanensis
Genus of bacteria
discriminative ability. However, most recent methods include multilocus sequence typing and multilocus PCR and electrospray ionization mass spectrometry, which
Acinetobacter
Species of parasite that causes sexually transmitted infections
Infectious Diseases. A 2023 study conducted using next-generation multilocus sequence typing found high genetic variation in T. vaginalis isolates of geographically
Trichomonas_vaginalis
Human infectious disease
Drukkerij. Godoy D; Randle G; Simpson AJ; Aanensen DM (May 2003). "Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis
Melioidosis
Topics referred to by the same term
for mycolactone biosynthesis Multilocus sequence analysis, a molecular biology technique involving Multilocus sequence typing Museum and Library Services
MLSA
Causes of tick-borne disease
burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing" (PDF). Proc Natl Acad Sci USA. 101 (39): 14150–5. Bibcode:2004PNAS
Microbiology_of_Lyme_disease
Family of bacteria
protein sequences concatenated using the rMLST platform for multilocus sequence typing. The class comprises one order, the Hydrogenophilales (type order)
Hydrogenophilaceae
Canadian bacteriologist
Helicobacter pylori, and Bordetella. Achtman was one of the inventors of multilocus sequence typing. His research has been funded by the Biotechnology and Biological
Mark_Achtman
Species of protozoan
Inter-Research Science Publisher. Johnson-MacKinnon, Jessica C (2019). "Multilocus Sequence Typing (MLST) and Random Polymorphic DNA (RAPD) Comparisons of Geographic
Neoparamoeba_pemaquidensis
Species of amphibian
derived, this could explain why their fossil record is poor. Multilocus sequence typing has proposed a Late Carboniferous/Early Permian origin around
Plains_spadefoot_toad
Information about a Genome Sequence (MIGS) specification. He also developed a web-based approach for multilocus sequence typing (MLST) using whole-genome
David_Ussery
Species of bacterium
larvae, the causative agent of American foulbrood, using a new multilocus sequence typing scheme". Environmental Microbiology. 17 (4): 1414–1424. Bibcode:2015EnvMi
Paenibacillus_larvae
Species of bacterium
Manning, Georgina; Dowson, Christopher; Forsythe, Stephen (2009). "Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable
Cronobacter_malonaticus
polymerase chain reaction, pulsed-field gel electrophoresis or multilocus sequence typing. A complication of this broad variety of techniques is the difficulty
Global_microbial_identifier
Group of mostly parasitic flagellates
Karin; Svärd, Staffan G. (June 2018). "A novel high-resolution multilocus sequence typing of Giardia intestinalis Assemblage A isolates reveals zoonotic
Diplomonad
Genus of bacteria
Leptospira lead to the development of multilocus VNTR (Variable Number of Tandem Repeats) typing and multilocus sequence typing (MLST) for species level identification
Leptospira
Class of bacteria
53-protein ribosomal protein concatamer analyses using the rMLST Multilocus sequence typing system) was published in 2017, that removed the order Hydrogenophilales
Betaproteobacteria
Species of fungus
(2014). "Comparative pathogenicity, biocontrol efficacy, and multilocus sequence typing of Verticillium nonalfalfae from the invasive Ailanthus altissima
Verticillium_nonalfalfae
Species of bacterium
Boris A.; Jardini, Teresa M.; Koike, Steven T. (2011-02-15). "Multilocus Sequence Typing of Pseudomonas syringae Sensu Lato Confirms Previously Described
Pseudomonas_amygdali
Species of bacterium
issue using techniques such as DNA:DNA homology and multilocus sequence typing. A whole genome sequence was carried out on the IFO 13350 strain of S. griseus
Streptomyces_griseus
Indian molecular epidemiologist
interaction over time. Ahmed's group has developed a widely used multilocus sequence typing scheme for species level identification of pathogenic Leptospira
Niyaz_Ahmed
Species of bacterium
Phylogeographic Structure of Borrelia lusitaniae Revealed by Multilocus Sequence Typing". PLOS ONE. 3 (12): 1–13. Bibcode:2008PLoSO...3.4002V. doi:10
Borrelia_lusitaniae
Litvintseva, A. P., Thakur, R., Vilgalys, R., & Mitchell, T. G. (2006). Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans
Thomas_G._Mitchell
Species of bacterium
rapid turnaround time not needing to undergo tedious culturing. Multilocus sequence typing (MLST) has also been implemented for diagnosis of C. upsaliensis
Campylobacter_upsaliensis
Genus of bacteria
to the family Enterobacteriaceae. It was proposed in 2013 after multilocus sequence analysis (MLSA) demonstrated that several species previously classified
Lelliottia
Species of fungus
2009 while investigating the cryptic lineages in A. terreus in a multilocus sequence typing (MLST) study of three protein-encoding genes: enolase (enoA),
Aspergillus_alabamensis
Professor at University of Cambridge
S. Enterica MLST Study Group (2012). Bessen, Debra E (ed.). "Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica". PLOS
Gordon_Dougan
Microbiological classification system for genus Salmonella
pulsed field gel electrophoresis, multiple-loci VNTR analysis, multilocus sequence typing, and multiplex-PCR. These "molecular serotyping" systems actually
Kauffmann–White classification
Kauffmann–White_classification
Identification of fungal species thanks to specific DNA sequences
Vilgalys R, Berger L, Murphy PJ, Longcore JE (February 2003). "Multilocus sequence typing suggests the chytrid pathogen of amphibians is a recently emerged
Fungal_DNA_barcoding
Species of bacterium
Anne M.; McNamara, Eleanor B.; Duffy, Geraldine (2012-01-01). "Multilocus Sequence Typing Methods for the Emerging Campylobacter Species C. hyointestinalis
Campylobacter_concisus
Species of beetle
multilocus sequence typing (MLST) markers to identify the types of Wolbachia that infected the Altica beetles. Wolbachia genes showed three sequence types
Altica_cirsicola
English mycologist (1945–2020)
flucytosine and terbinafine is linked to MAT locus homozygosity and multilocus sequence typing clade 1. Fems Yeast Research. 9: 1091–101. PMID 19799637 DOI:
Frank_Odds
Field of study
the function of a system. Comparative genomics Phylogenomics Multilocus sequence typing Bacterial taxonomy Computational phylogenetics History of molecular
Microbial_phylogenetics
Species of bacterium
"Taxonomic evaluation of Streptomyces albus and related species using multilocus sequence analysis and proposals to emend the description of Streptomyces albus
Streptomyces_albus
Genus of bacteria
microbiologist Yoshimasa Kosako. Phylogenetic analyses based on multilocus sequence analysis (MLSA) led to the creation of this distinct genus within
Kosakonia
Species of bacterium
Retrieved 2014-07-10. UniProt De Meyer, S. E.; Willems, A (2012). "Multilocus sequence analysis of Bosea species and description of Bosea lupini sp. nov
Bosea_lathyri
Epidemiology method
increased. This approach is referred to as multi-locus sequence typing (MLST). Similar to single-locus typing, MLST requires the selection of specific loci to
Source_attribution
University academic and researcher
both in 2016. He is widely known as a developer of method of molecular typing of bacteria MLST.[citation needed] "Martin C.J. Maiden". The Maiden Lab
Martin Maiden (microbiologist)
Martin_Maiden_(microbiologist)
Species of bacterium
individuals with lung disease. Norskov-Lauritsen, N. (1 January 2005). "Multilocus sequence phylogenetic study of the genus Haemophilus with description of Haemophilus
Haemophilus_pittmaniae
RF, Schouls LM, Söderlund R, Börjesson S, Åkerström S (2013). "Use of multilocus variable-number tandem repeat analysis (MLVA) in eight European countries
Multiple_loci_VNTR_analysis
Species of bacterium
"Taxonomic evaluation of Streptomyces albus and related species using multilocus sequence analysis and proposals to emend the description of Streptomyces albus
Streptomyces_pathocidini
Genus of fungi
Guardiola Y, Saleh M, Wong B, Bogale M, O'Hara MJ, Untereiner WA (2015). "Multilocus DNA sequencing of the whiskey fungus reveals a continental-scale speciation
Baudoinia
DNA profiling technique
radiolabeling to produce characteristic multilocus banding patterns. AP-PCR does not require prior sequence information and was among the first PCR–based
Arbitrarily_primed_PCR
Species of bacterium
Bordetella spp.: phylogenetic analysis using multilocus enzyme electrophoresis and typing with three insertion sequences". J Bacteriol. 179 (21): 6609–17. doi:10
Bordetella_parapertussis
Species of bacterium
Straininfo of Bosea robiniae UniProt De Meyer, S. E.; Willems, A (2012). "Multilocus sequence analysis of Bosea species and description of Bosea lupini sp. nov
Bosea_robiniae
Species of bacterium
papavericola. Further investigation of pathogenicity profiles and multilocus sequencing typing suggested that the list could be narrowed down to just three
Xanthomonas_campestris
Species of fungus
1017/S0953756299001756. Bischoff J.F.; Rehner S.A. Humber R.A. (2009). "A multilocus phylogeny of the Metarhizium anisopliae lineage". Mycologia. 101 (4):
Metarhizium_anisopliae
Family of bacteria
phylogenetic trees constructed from conserved genome sequences, 16S rRNA sequences and multilocus sequence analyses. Molecular markers, specifically conserved
Yersiniaceae
Basic unit of taxonomic classification, below genus
mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology
Species
Species of bacterium
Fortier, G; Andre-Fontaine, G; Leclercq, R (Feb 2010). "Multilocus sequence analysis for typing Leptospira interrogans and Leptospira kirschneri". Journal
Leptospira_kirschneri
Family of bacteria
phylogenetic trees constructed from conserved genome sequences, 16S rRNA sequences and multilocus sequence analyses. Molecular markers, specifically conserved
Budviciaceae
initially used for genetic typing, strain discrimination, genome mapping, phylogenetic analysis, and population analysis, in that sequence, and their subsequent
Arbitrarily_amplified_DNA
Species of bacterium
nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis". Systematic and Applied Microbiology. 35 (2): 73–80. doi:10
Micromonospora_fulviviridis
Species of fungus
wood-decay fungi in North America and their phylogenetic placement from multilocus DNA sequence analysis". Mycologia. 96 (6): 1280–93. doi:10.2307/3762145. JSTOR 3762145
Penicillium_decaturense
Species of bacterium
taxonomy of a diverse collection of Bradyrhizobium strains based on multilocus sequence analysis of the 16S rRNA gene, ITS region and glnII, recA, atpD and
Bradyrhizobium_betae
Model in statistical genetics
framework: 1) full-likelihood or full-data methods which operate on multilocus sequence alignments directly, including both maximum likelihood and Bayesian
Multispecies coalescent process
Multispecies_coalescent_process
Species of bacterium
Motreff, L; Passet, V; Fernandez, JC; Bizet, C; Brisse, S (May 2015). "Multilocus sequence analysis of the genus Citrobacter and description of Citrobacter
Citrobacter_pasteurii
Genus of bacteria and the disease it can cause
Recent phylogenies have been constructed based on a suite of genes (multilocus sequence analysis). O. F. Müller (1773, 1786) described eight species of the
Vibrio
Laboratory technique to multiply a DNA sample for study
salivarius streptococci as inferred from multilocus phylogenies based on 16S rRNA-encoding, recA, secA, and secY gene sequences". BMC Microbiology. 9 232. doi:10
Polymerase_chain_reaction
Species of bacterium
ZY; Xue, H; Wang, LF; Tian, GZ; Piao, CG; Li, Y (November 2015). "Multilocus sequence analysis of the genus Kurthia, and a description of Kurthia populi
Kurthia_populi
Species of bird
Ohlson, Jan I.; Price, Trevor D.; Ericson, Per G. P. (2013). "A complete multilocus species phylogeny of the tits and chickadees (Aves: Paridae)". Molecular
Mountain_chickadee
Relevance of genotype to race classification
or gene expression caused by mechanisms other than changes in the DNA sequence. Human phenotypes are highly polygenic (dependent on interaction by many
Race_and_genetics
Family of bacteria
phylogenetic trees constructed from conserved genome sequences, 16S rRNA sequences and multilocus sequence analyses. Molecular markers, specifically conserved
Pectobacteriaceae
Genus of birds
of the genus Tropicoperdix Blyth 1859 (Phasianidae, Aves) using multilocus sequence data". Zoological Journal of the Linnean Society. 175 (2): 429–438
Arborophila
Species of bacterium
taxonomy of a diverse collection of Bradyrhizobium strains based on multilocus sequence analysis of the 16S rRNA gene, ITS region and glnII, recA, atpD and
Bradyrhizobium_denitrificans
Genus of bacteria
Coopman R, Bekki A, Mars M, Willems A, de Lajudie P (March 2010). "Multilocus sequence analysis of root nodule isolates from Lotus arabicus (Senegal), Lotus
Ensifer_(bacterium)
Family of bacteria
phylogenetic trees constructed from conserved genome sequences, 16S rRNA sequences and multilocus sequence analyses. Molecular markers, specifically conserved
Erwiniaceae
Genus of bacteria
Castro, Nuria; Nicolas, Pierre; Duchaud, Eric (1 September 2014). "Multilocus Sequence Analysis of the Marine Bacterial Genus Tenacibaculum Suggests Parallel
Tenacibaculum
Species of bacterium
nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis." Systematic and Applied Microbiology 35.2 (2012): 73–80
Micromonospora_chokoriensis
Starchy tuber used as a staple food
Glenn J. (29 September 2005). "A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping". Proceedings of the
Potato
Species of bacterium
Álvarez-Pérez, Sergio; de Vega, Clara; Herrera, Carlos (2013). "Multilocus Sequence Analysis of Nectar Pseudomonads Reveals High Genetic Diversity and
Pseudomonas_rhizosphaerae
Species of bacterium
Menna, Pâmela; Bangel, Eliane Villamil; Hungria, Mariangela (2012). "Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity
Bradyrhizobium_iriomotense
Species of fungus
previously classified as T. mentagrophytes type VIII de Hoog GS, Dukik K, Monod M, et al. (2017). "Toward a novel multilocus phylogenetic taxonomy for the dermatophytes"
Trichophyton_mentagrophytes
Genus of Gram-negative bacteria
laser-desorption/ionization time-of-flight mass spectrometry and multilocus sequence analysis approaches in species discrimination within the genus Pseudomonas"
Pseudomonas
Genus of bacteria
2013). "Taxonomic evaluation of the genus Enterobacter based on multilocus sequence analysis (MLSA): Proposal to reclassify E. nimipressuralis and E
Pluralibacter
Family of bacteria
phylogenetic trees constructed from conserved genome sequences, 16S rRNA sequences and multilocus sequence analyses. Molecular markers, specifically conserved
Hafniaceae
Species of bird
Cheng-Te; Miller, Lindsey N; Moreland, Kathleen N; Lei, Fumin (2015). "A multilocus molecular phylogeny for the avian genus Liocichla (Passeriformes: Leiothrichidae:
Bugun_liocichla
Genus of bacteria
Gugino, B; Bull, CT (January 2024). "Multilocus sequence and phenotypic analysis of Pectobacterium and Dickeya type strains for identification of soft rot
Dickeya
Study of lichen taxonomy and evolution
genetic analysis (often multilocus) is used to test those hypotheses, merging or splitting as needed. Others invert the sequence: barcode data first reveal
Lichen_systematics
Group of genes from one parent
"pheno-group". Haplotype estimation International HapMap Project Haplogroup Y-STR Multilocus genotype By C. Barry Cox, Peter D. Moore, Richard Ladle. Wiley-Blackwell
Haplotype
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
Girl/Female
Tamil
Line, Sentence
Boy/Male
Indian, Sikh
Music; In-sequence
Boy/Male
Tamil
Symbol, First word in a sentence
Girl/Female
Hindu
Line, Sentence
Girl/Female
Muslim
Sentence, Writing, Essay
Girl/Female
Biblical
A dividing, a sentence.
Girl/Female
Tamil
Line, Sentence
Girl/Female
Hindu
Line, Sentence
Girl/Female
Bengali, Gujarati, Hindu, Indian, Kannada, Malayalam, Marathi, Sanskrit, Telugu
Sequence
Biblical
a dividing; a sentence
Boy/Male
Tamil
Sentence
Girl/Female
Biblical
Dividing, sentence.
Girl/Female
Hindu, Indian
Sentence
Girl/Female
Indian, Sanskrit
Sentence
Girl/Female
Indian
Sentence, Writing, Essay
Girl/Female
Tamil
Anuloma | அநà¯à®²à¯‹à®®à®¾
Sequence
Anuloma | அநà¯à®²à¯‹à®®à®¾
Boy/Male
Tamil
Symbol, First word in a sentence
Biblical
dividing, sentence
Boy/Male
Hindu
Sentence
Boy/Male
Indian, Sanskrit
Order; Sequence
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
Surname or Lastname
English
English : variant of Wild, with the addition of Middle English man ‘man’.German (Wildmann) : from a short form of the Germanic personal name Wilto + Middle High German man ‘man’.
Girl/Female
Assamese, Gujarati, Hindu, Indian, Kannada, Malayalam, Marathi, Sanskrit, Telugu
Goddess of Spring
Male
Greek
(Σήθος) Greek form of Egyptian Sutekh, possibly SETHOS means "one who dazzles." In mythology, this is the name of an ancient evil god of Chaos, storms, and the desert, who slew Osiris.Â
Girl/Female
Muslim/Islamic
Light
Female
Vietnamese
Vietnamese name NGUYET means "moon."
Boy/Male
Australian, Chinese, French, German, Italian, Latin, Swiss
Works with the Hands; Craftsman
Girl/Female
Muslim
Sharp
Boy/Male
Muslim/Islamic
It was the name of the Tabiee Abu Salih
Boy/Male
American, British, English
Owns Taxed Land
Girl/Female
Muslim
She was a literary woman and a poetess in qastaniniyah
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
MULTILOCUS SEQUENCE-TYPING
n.
Excess of words or talk.
n.
A going before; anticipation in sequence or order.
v. t.
To utter sententiously.
adv.
In natural sequence; consequently; so.
n.
A want of grammatical sequence or coherence in a sentence; an instance of a change of construction in a sentence so that the latter part does not syntactically correspond with the first part.
v. t.
To decree or announce as a sentence.
pl.
of Sequela
n.
A melodic phrase or passage successively repeated one tone higher; a rosalia.
n.
A hymn introduced in the Mass on certain festival days, and recited or sung immediately before the gospel, and after the gradual or introit, whence the name.
imp. & p. p.
of Sentence
n.
Simple succession, or the coming after in time, without asserting or implying causative energy; as, the reactions of chemical agents may be conceived as merely invariable sequences.
a.
Mutilated; defective; imperfect.
n.
That which follows or succeeds as an effect; sequel; consequence; result.
n.
All five cards, of a hand, in consecutive order as to value, but not necessarily of the same suit; when of one suit, it is called a sequence flush.
a.
Lacking grammatical sequence.
n.
That which follows as a result; a sequence.
n.
Three or more cards of the same suit in immediately consecutive order of value; as, ace, king, and queen; or knave, ten, nine, and eight.
n.
Any succession of chords (or harmonic phrase) rising or falling by the regular diatonic degrees in the same scale; a succession of similar harmonic steps.
p. pr. & vb. n.
of Sentence
n.
The state of being sequent; succession; order of following; arrangement.