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Sections of the genome experiencing minimal changes across species
of organisms. Another term for ultraconserved element is ultraconserved region (UCR). The term "ultraconserved element" was originally defined as a genome
Ultraconserved_element
Order of springtails
Feng (2020). "Streamlining universal single-copy orthologue and ultraconserved element design: A case study in Collembola". Molecular Ecology Resources
Symphypleona
Class of arthropods
(May 2020). "Streamlining universal single-copy orthologue and ultraconserved element design: a case study in Collembola". Molecular Ecology Resources
Springtail
Genus of the spider M. fulva
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 e6864. doi:10.7717/peerj.6864. PMC 6501763. PMID 31110925
Megahexura
Family of fishes
a maximum likelihood phylogenetic tree from a 2023 analysis of ultraconserved element (UCE) loci, while the right one is based on 2026 study's maximum
Alestidae
Division of plant life
doi:10.1046/j.1529-8817.2001.01126.x. S2CID 51945442. A three-genome ultraconserved element phylogeny of Cryptophytes A molecular timescale for eukaryote evolution
Red_algae
Species of spider
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 (e6864): 15. doi:10.7717/peerj.6864. PMC 6501763
Hexura_rothi
Suborder of beetles
beetle suborder Adephaga with comparison of tailored and generalized ultraconserved element probe performance". Systematic Entomology. 45 (3): 552–570. Bibcode:2020SysEn
Adephaga
Species of bird
major M. r. rubratra M. r. dichromata Vinciguerra et al.'s 2026 ultraconserved element-based phylogeny of the genus Myzomela proposed the following topologies
Micronesian_myzomela
Superfamily of arachnids
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 e6864. doi:10.7717/peerj.6864. PMC 6501763. PMID 31110925
Atypoidea
Common type of liver cancer
"Expression and functional role of a transcribed noncoding RNA with an ultraconserved element in hepatocellular carcinoma". Proceedings of the National Academy
Hepatocellular_carcinoma
Protein-coding gene in the species Homo sapiens
contains a long, highly evolutionarily conserved sequence known as an Ultraconserved Element (UCE) that is within the retained intron and overlaps the alternative
ARGLU1
DNA sequence
of DNA replication; centromeres; and telomeres (see Non-coding DNA). Ultraconserved regions (UCRs) are regions over 200 bp in length with 100% identity
Conserved_non-coding_sequence
Species of bird
Mesoamerica: Phylogeny inferred from mitochondrial, intron, and ultraconserved element sequences". Molecular Phylogenetics and Evolution. 102: 320–330
Baudo_guan
Genus of spiders
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 (e6864): 1–24. doi:10.7717/peerj.6864. PMC 6501763
Atypoides
Species of spider
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 e6864. doi:10.7717/peerj.6864. ISSN 2167-8359. PMC 6501763
Hexura_picea
Genus of spiders
mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci". PeerJ. 7 (e6864): 15. doi:10.7717/peerj.6864. PMC 6501763
Hexura
Genus of ant
although it was separated in 2025 into its own genus based on ultraconserved element phylogenomic analysis. Its scientific name means "remnant ant" from
Retalimyrma
Protein-coding gene in the species Homo sapiens
"Expression and functional role of a transcribed noncoding RNA with an ultraconserved element in hepatocellular carcinoma". Proceedings of the National Academy
PCBP2
RNA family
"Expression and functional role of a transcribed noncoding RNA with an ultraconserved element in hepatocellular carcinoma". Proceedings of the National Academy
TUC338
Type of nucleic acid sequence
(June 2006). "The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator". Genes
Short interspersed nuclear element
Short_interspersed_nuclear_element
Genus of birds
relationship between this genus and Andigena differs between analyses of ultraconserved elements (UCEs) and mitochondrial DNA sequence data. UCE analysis shows
Ramphastos
Mechanism of evolution by differential reproduction
Bejerano, Gill; Pheasant, Michael; Makunin, Igor; et al. (28 May 2004). "Ultraconserved Elements in the Human Genome" (PDF). Science. 304 (5675): 1321–1325
Natural_selection
Non-coding RNA
(June 2006). "The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator". Genes
DLX6-AS1
Similar DNA, RNA or protein sequences within genomes or among species
1186/1471-2105-8-374. PMC 2194792. PMID 17919331. Bejerano, G. (28 May 2004). "Ultraconserved Elements in the Human Genome". Science. 304 (5675): 1321–1325. Bibcode:2004Sci
Conserved_sequence
Non-protein coding transcripts longer than 200 nucleotides
growth. Indeed, the transcription and expression of similar non-coding ultraconserved elements was shown to be abnormal in human leukaemia and to contribute
Long_non-coding_RNA
Faircloth, Brant C.; Wilson, Nerida G.; Rouse, Greg W. (March 2021). "Using ultraconserved elements to track the influence of sea-level change on leafy seadragon
Genome evolution in seadragons
Genome_evolution_in_seadragons
DNA changes that regulate human traits
differentiation during embryonic development. Evf2 is transcribed from an ultraconserved region, or a region that is very highly conserved among most vertebrate
Epigenetics of human development
Epigenetics_of_human_development
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