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Mathematical models representing biological cells
Cell-based models are mathematical models that represent biological cells as discrete entities. Within the field of computational biology they are often
Cell-based_models
Type of computational models
developing models using interaction data of various system components. Exploratory Agent-based Modeling Level for developing agent-based models for assessing
Agent-based_model
Modeling biology
Agent-based models have many applications in biology, primarily due to the characteristics of the modeling method. Agent-based modeling is a rule-based, computational
Agent-based_model_in_biology
Computational model of cells and tissues
same cell ID (analogous to spin in Potts models in physics). Lattice sites that are not occupied by cells are the medium. The dynamics of the model are
Cellular_Potts_model
Romanian-American scientist
is renowned for his groundbreaking work creating and applying stem cell-based models of the human brain to gain insights into neuropsychiatric disease
Sergiu_P._Pașca
mathematical models to help understand and make predictions of biological processes. Specialized software to assist in building models has been developed
List of systems biology modeling software
List_of_systems_biology_modeling_software
Tropical atmospheric circulation feature
Several theories and physical models have attempted to explain the latitudinal width of the Hadley cell. The Held–Hou Model provides one theoretical constraint
Hadley_cell
Describes how neurons transmit electric signals
Hodgkin–Huxley models. Models often incorporate highly complex geometries of dendrites and axons, often based on microscopy data. Stochastic models of ion-channel
Hodgkin–Huxley_model
Alternative to silicon-based photovoltaics
cell (PSC) is a type of solar cell that includes a perovskite-structured compound, most commonly a hybrid organic–inorganic lead or tin halide-based material
Perovskite_solar_cell
Discrete model of computation
theoretical biology, and microstructure modeling. A cellular automaton consists of a regular grid of cells, each in one of a finite number of states
Cellular_automaton
Cell line
time in cell culture, A549 cells may begin to differentiate, as signaled by the presence of multilamellar bodies. A549 cells have served as models of alveolar
A549_cell
Neuroscientific theory
synaptic efficacy arises from a presynaptic cell's repeated and persistent stimulation of a postsynaptic cell. It is an attempt to explain synaptic plasticity
Hebbian_theory
Model to simulate Li-ion cells electrical dynamics
Li-ion battery modeling through equivalent circuit models Equivalent circuit models for Li-ion cells Matlab tool for equivalent circuit models development
Equivalent circuit model for Li-ion cells
Equivalent_circuit_model_for_Li-ion_cells
Cell Transmission Model (CTM) is a popular numerical method proposed by Carlos Daganzo to solve the kinematic wave equation. Lebacque later showed that
Cell_Transmission_Model
Collection of loosely coupled services used to build computer applications
mechanisms. Cell-based architecture is a distributed computing design in which computational resources are organized into self-contained units called cells. Each
Microservices
Biology software
Stuart Newman. CompuCell introduced the use of XML for model specification, allowing modelers to define and explore cell-based models without writing low-level
CompuCell3D
Mathematical descriptions of the properties of certain cells in the nervous system
similar cells. Overview of neuron models Neuron models can be divided into two categories according to the physical units of the interface of the model. Each
Biological_neuron_model
American bioengineer and molecular biologist
using AI to advance cell-based models. His work has contributed to: DNA foundation models that enable biological sequence modeling and design across molecular
Patrick_Hsu
Computer program for working with tabular data
programming models have analogs in the spreadsheet world. For example, the sequential model of the indexed loop is usually represented as a table of cells, with
Spreadsheet
Composite blood component made of protein and phospholipids
the extrinsic pathway. However, the model better describing how coagulation works is the so-called cell-based model, a more integrated picture of the whole
Thromboplastin
Activation or suppression of the immune system to treat disease
current approaches for DC-based vaccination are mainly based on antigen loading on in vitro-generated DCs from monocytes or CD34+ cells, activating them with
Immunotherapy
Biological membrane that separates the interior of a cell from its outside environment
Despite the numerous models of the cell membrane proposed prior to the fluid mosaic model, it remains the primary archetype for the cell membrane long after
Cell_membrane
cellular model or virtual cell is a computational model of aspects of a biological cell, for the purposes of in silico research. Developing such models has
Cellular_model
Method of designing specialized integrated circuits
other aspects of the cell views and models. And other files may be created to support various tools that utilize the standard cells for a plethora of other
Standard_cell
Process which distributes thermal energy about Earth's surface
planet are organised into three cells in each hemisphere—the Hadley cell, the Ferrel cell, and the polar cell. Those cells exist in both the northern and
Atmospheric_circulation
Process by which cells are grown under controlled conditions
Cell culture or tissue culture is the process by which cells are grown under controlled conditions, generally outside of their natural environment. After
Cell_culture
Method of sending messages to multiple mobile phone users
or citywide alerting, weather reports, mass messaging, location-based news, etc. Cell broadcast has been widely deployed since 2008 by major Asian, US
Cell_Broadcast
Model range of watches by Citizen
the advent of cell phones and their timekeeping capability, demand for Citizen watches in North America remained robust. Eco-Drive models were well received
Eco-Drive
Coding language
CellML is an XML based markup language for describing mathematical models. Although it could theoretically describe any mathematical model, it was originally
CellML
Dependence of the state of a system on its history
The most known empirical models in hysteresis are Preisach and Jiles-Atherton models. These models allow an accurate modeling of the hysteresis loop and
Hysteresis
Basic unit of life forms
A biological cell basically consists of a semipermeable cell membrane enclosing cytoplasm that contains genetic material. Most cells are only visible
Cell_(biology)
Cancer cells with features of normal cells
developed based on animal models, where therapies able to promote tumor shrinkage were deemed effective. However, animals do not provide a complete model of
Cancer_stem_cell
Subcompact executive car
300 million to fix it. All A-Class models are powered by four-cylinder engines, with 1.4 L and 1.6 L petrol models at launch (M 166 series), followed
Mercedes-Benz_A-Class
Theory that living organisms are made up of cells
all cells come from pre-existing cells. Cells are the basic unit of structure in all living organisms and also the basic unit of reproduction. Cell theory
Cell_theory
Weather prediction using mathematical models of the atmosphere and oceans
weather prediction (NWP) uses mathematical models of the atmosphere and oceans to predict the weather based on current weather conditions. Though first
Numerical_weather_prediction
Academic journal
Caenorhabditis elegans Unique in vitro or ex vivo models, such as stem-cell-based models, organoids and systems based on patient material Microorganisms such as
Disease_Models_&_Mechanisms
Process of formation of blood clots
102160. PMC 10506138. PMID 37727847. Hoffman M (September 2003). "A cell-based model of coagulation and the role of factor VIIa". Blood Rev. 17 (Suppl 1):
Coagulation
Cell line
(MDCK) cells are a model mammalian cell line used in biomedical research. MDCK cells are used for a wide variety of cell biology studies including cell polarity
Madin-Darby canine kidney cells
Madin-Darby_canine_kidney_cells
Power supply with electrochemical cells
Other primary wet cells are the Leclanche cell, Grove cell, Bunsen cell, Chromic acid cell, Clark cell, and Weston cell. The Leclanche cell chemistry was
Electric_battery
Cell-based vaccines are developed from mammalian or more rarely avian or insect cell lines rather than the more common method which uses the cells in embryonic
Cell-based_vaccine
database retains the spreadsheet's interactive cell-based modelling capability. This makes possible models that more closely reflect the complexities of
Functional_database_model
Research field in deep learning
dimension of cells or relations. Useful when relations in the data do not adhere to constraints imposed by other models like simplicial and cell complexes
Topological_deep_learning
Nanotechnology simulation of human organ function
approximation of complex tissues than standard cell culture, they provide the potential as an alternative to animal models for drug development and toxin testing
Organ-on-a-chip
A tin-based perovskite solar cell (TPSCs) is a special type of perovskite solar cell, based on a tin perovskite structure (ASnX3, where 'A' is a monovalent
Tin-based perovskite solar cell
Tin-based_perovskite_solar_cell
binding and activation, pheromone secretion and diffusion, cell division and movement of cells. Models specified in ML-Rules can be simulated using the James
Multi-state modeling of biomolecules
Multi-state_modeling_of_biomolecules
Model of cell membranes
within the cell membrane are dynamic rather than static. Previous models of biological membranes included the Robertson Unit Membrane Model and the Davson-Danielli
Fluid_mosaic_model
Treatment method for Parkinson's disease
Cell-based therapies for Parkinson's disease include various investigational procedures which transplant specific populations of cells into the brains
Cell-based therapies for Parkinson's disease
Cell-based_therapies_for_Parkinson's_disease
Method of growing stem cells
Air–liquid interface cell culture (ALI) is a method of cell culture by which basal stem cells are grown with their basal surfaces in contact with media
Air–liquid interface cell culture
Air–liquid_interface_cell_culture
Light commercial van produced by Mercedes-Benz
whereas the Extra-Long model turns in 12.5 m (41 ft). Japan passenger models were sold as the V-Class, as the V 350. Early models included V 350 Trend (RHD)
Mercedes-Benz_Vito
Ability of cell membranes to deform elastically
the numerous models that have been developed to describe the deformation of cell membranes, a widely accepted model is the fluid mosaic model proposed by
Elasticity_of_cell_membranes
Free-floating three-dimensional culture of cells
in healthy and cancerous breast tissue models. These techniques have been applied to in vitro disease models used to evaluate cellular responses to pharmaceutical
3D_cell_culture
Endogenous non-cancerous pluripotent stem cell
model that received human-Muse cell intravenous injection. The neural regeneration capability of Muse cells has been demonstrated in several models.
Muse_cell
Approach using a set of rules that indirectly specifies a mathematical model
Rule-based modeling is a modeling approach that uses a set of rules that indirectly specifies a mathematical model. The rule-set can either be translated
Rule-based_modeling
French model scout and sex trafficker (1946–2022)
York-based Ford Modeling Agency), who had sent her models to Brunel for assignments in Paris, told 60 Minutes that she had not known that models complained
Jean-Luc_Brunel
Device used to produce electricity from light
A solar cell, also known as a photovoltaic cell (PV cell), is an electronic device that converts the energy of light directly into electricity by using
Solar_cell
bacterial cells. The exact count of human cells has not yet been empirically measured in its entirety and is estimated using different approaches based on smaller
List_of_human_cell_types
Type of molecule that may be able to induce death of senescent cells
of the Bcl-2 family inhibitor ABT-263 in a panel of small cell lung cancer xenograft models". Clinical Cancer Research. 14 (11): 3268–3277. doi:10.1158/1078-0432
Senolytic
Species of fish
Look, A. T. (2017), "Zebrafish models of leukemia", The Zebrafish - Disease Models and Chemical Screens, Methods in Cell Biology, vol. 138, Elsevier, pp
Zebrafish
Stem cell biologist
independent lab at the New York Stem Cell Foundation (NYSCF). Her lab has established protocols for human stem cell-based models to study glia. She also leads
Valentina_Fossati
Male reproductive cell
male reproductive cell, or gamete, in anisogamous forms of sexual reproduction (forms in which there is a larger, female reproductive cell and a smaller,
Sperm
Organisms used to study biology across species
robust model of human diseases in an animal model. Animal models observed in the sciences of psychology and sociology are often termed animal models of behavior
Model_organism
Set of principles for modeling solid geometry
respectively. Both models specify how solids can be built from simple pieces or cells. According to the continuum point-set model of solidity, all the
Solid_modeling
International modeling agency
Jean-Luc Brunel began his career as a model agent in Paris in the late 1970s, becoming head of the Karin Models agency in 1978. He claimed to have launched
MC2_Model_Management
Compartmentalized organizational structure
A clandestine cell system is a method for organizing a group of people, such as resistance fighters, spies, mercenaries, organized crime members, or terrorists
Clandestine_cell_system
Topical clustering method
models was proposed based on the stochastic block model. Topic modeling has leveraged LLMs through contextual embedding and fine tuning. Topic models
Topic_model
Subset of T lymphocytes
viruses, bacteria and cancer cells, compared to TEM lymphocytes in several experimental models. Effector memory T cells (TEM): TEM and TEMRA lymphocytes
Memory_T_cell
Process in multicellular organisms
Based on some mathematical models, recent studies hypothesize a novel biological model for collective biomechanical and molecular mechanism of cell motion
Cell_migration
Use of stem cells to treat or prevent a disease or condition
market treatments based on transplant of stored umbilical cord blood have been controversial. For over 90 years, hematopoietic stem cell transplantation
Stem-cell_therapy
New Zealand mathematical modeller
mathematical and stochastic models and areas of expertise include ecological and social networks, population dynamics, epidemiological models and marine ecosystems
Michael_Plank
3D printing to create biomedical parts
construct. Laser-based bioprinting can be split into two major classes: those based on cell transfer technologies or photo-polymerization. In cell transfer laser
3D_bioprinting
Computer modelling of a petroleum reservoir
reservoir represented by the cell. Reservoir models typically fall into two categories: Geological models are created by geologists and geophysicists and
Reservoir_modeling
Type of immune cell
The T helper cells (Th cells), also known as CD4+ cells or CD4-positive cells, are a type of T cell that play an important role in the adaptive immune
T_helper_cell
Research in the field of photovoltaics
solar cells cheaper and/or more efficient to effectively compete with other energy sources; developing new technologies based on new solar cell architectural
Solar_cell_research
Any biological cell forming the body of an organism
In cellular biology, a somatic cell (from Ancient Greek σῶμα (sôma) 'body'), or vegetal cell, is any biological cell forming the body of a multicellular
Somatic_cell
Transistor that uses both electrons and holes as charge carriers
transistor dynamics in greater detail than the terminal-based models typically do. This model also includes the dependence of transistor β {\displaystyle
Bipolar_junction_transistor
Mouse carrying functioning human genes, cells, etc.
that has functioning human genes, cells, tissues and/or organs. Humanized mice are commonly used as small animal models in biological and medical research
Humanized_mouse
Mathematical model
were in early phase-field models performed up to the lower order in ε {\displaystyle \varepsilon } only, more recent models use higher order asymptotics
Phase-field_model
Mobile phone
luxurious or fashionable cell phone. The earliest StarTAC models were made for analog AMPS networks while later digital GSM models were made for various
StarTAC
Model of cognition's operation
Internalism's cognitive models into three groups of representations of cognitive processes in humans: Box-and-Arrow models, these models identify the components
Cognitive_model
Semiconducting material used in solar cell technology
silicon—they are sometimes called wafer-based solar cells. Solar cells made from c-Si are single-junction cells and are generally more efficient than their
Crystalline_silicon
Genetically engineered T cell
Chimeric antigen receptor T cells (CAR T cells)—also known as chimeric immunoreceptors, chimeric T cell receptors or artificial T cell receptors—are receptor
CAR_T_cell
Israeli Arab researcher in molecular biochemistry
are also known as "Stem-Cell-Based complete Embryo Models - SCBEMs", "Synthetic Embryos" or "High Fidelity Whole Embryo Models"). Hanna pioneered the extended
Jacob_Hanna
Repeating unit of a myofibril in a muscle cell
contraction (based on the sliding filament model). The protein tropomyosin covers the myosin-binding sites of the actin molecules in the muscle cell. For a
Sarcomere
Recurrent neural network architecture
trained LSTM to learn languages unlearnable by traditional models such as Hidden Markov Models. Hochreiter et al. used LSTM for meta-learning (i.e. learning
Long_short-term_memory
Device that converts the chemical energy from a fuel into electricity
A fuel cell is an electrochemical cell that converts the chemical energy of a fuel (often hydrogen) and an oxidizing agent (often oxygen) into electricity
Fuel_cell
2000 film by Tarsem Singh
The Cell is a 2000 science fiction psychological horror film directed by Tarsem Singh in his feature directorial debut, written by Mark Protosevich, and
The_Cell_(film)
British neuroscientist
uses cells derived from dementia patients to create laboratory models that replicate key features of the disease. These stem‑cell‑based models are used
Selina_Wray
White blood cells of the immune system
essential for Treg cells to differentiate from naïve CD4+ cells and is important in maintaining Treg cell homeostasis. Mouse models have suggested that
Regulatory_T_cell
Oldest cultured human cell line (1951)
an immortalized cell line used in scientific research. It is the oldest human cell line and one of the most commonly used. HeLa cells are durable and
HeLa
Gene editing method
models within the field of genetics. Cas9 can be easily introduced into the target cells along with sgRNA via plasmid transfection in order to model the
CRISPR_gene_editing
and telecommunications, stochastic geometry models of wireless networks refer to mathematical models based on stochastic geometry that are designed to
Stochastic geometry models of wireless networks
Stochastic_geometry_models_of_wireless_networks
Medical condition
types of research models: Cell-based models and model organisms. Common cell-based models include patient cells such as fibroblast cells derived from skin
SRD5A3-CDG
description of collective cell migration explains that the following types of models can be used: Lattice models (e.g. BIO-LGCA models) Models similar to Dissipative
Collective_cell_migration
White blood cell that secretes large volumes of antibodies
Plasma cells, also called plasma B cells or effector B cells, are white blood cells that originate in the lymphoid organs as B cells and secrete large
Plasma_cell
Biological theory of intelligence
brain activity and a more biologically-realistic neuron model (often also referred to as cell, in the context of HTM). There are two core components in
Hierarchical_temporal_memory
Stem cell-based embryo model
as an embryo but rather as a model. As compared to other stem cell-based embryo models (e.g., Gastruloids), blastoids model the preimplantation stage and
Blastoid_(embryoid)
Branch of biology
tessellation models and complete self-reproduction, chaotic systems in organisms, relational biology and organismic theories. Modeling cell and molecular
Mathematical and theoretical biology
Mathematical_and_theoretical_biology
Protein complex on the surface of T cells that recognizes antigens
proofreading model have been proposed, but evidence for the models is still controversial. The antigen sensitivity is higher in antigen-experienced T cells than
T-cell_receptor
Type of plane partition
radiography in High energy density physics. In medical diagnosis, models of muscle tissue, based on Voronoi diagrams, can be used to detect neuromuscular diseases
Voronoi_diagram
Simulation of a roundworm
built for the project and models of the neural connectome and a muscle cell have been created in NeuroML format. A 3D model of the worm anatomy can be
OpenWorm
CELL BASED-MODELS
CELL BASED-MODELS
Male
English
Short form of English unisex Kelly, KELL means "bright-headed."
Surname or Lastname
English
English : variant of Mill.German : variant of Melle.
Boy/Male
Afghan, African, Arabic, Australian, Chinese, Greek, Indian, Muslim
Brave
Surname or Lastname
English (chiefly northern)
English (chiefly northern) : topographic name for someone who lived by an area of high ground or by a prominent crag, from northern Middle English fell ‘high ground’, ‘rock’, ‘crag’ (Old Norse fjall, fell).English, German, and Jewish (Ashkenazic) : metonymic occupational name for a furrier, from Middle English fell, Middle High German vel, or German Fell or Yiddish fel, all of which mean ‘skin’, ‘hide’, or ‘pelt’. Yiddish fel refers to untanned hide, in contrast to pelts ‘tanned hide’ (see Pilcher).
Surname or Lastname
English (Essex)
English (Essex) : unexplained; perhaps from the personal name Yuel, a form of the Biblical name Joel.Scottish (Shetland) : from the name of the principal island of the Shetlands. According to Black, ‘Persons of this name in Shetland have changed to Dalziel, probably from the idea of its being more aristocratic, and spell
Boy/Male
Muslim/Islamic
Smiling
Surname or Lastname
English
English : topographic name for someone who lived in a small valley, from Middle English, Old English dell ‘dell’, ‘valley’, or a habitational name from any of several minor places named Dell, from this word, for example in Buckinghamshire, Essex, and Sussex.German : from Low German delle ‘dell’, ‘depression’ (Middle High German telle ‘gorge’).
Surname or Lastname
English
English : topographic name for someone who lived near a spring or stream, Middle English well(e) (Old English well(a)).German : from a short form of the personal names Wallo, Walilo.German : nickname from Middle High German wël ‘round’.
Female
English
Pet form of English Eleanor, NELL means "foreign; the other."
Boy/Male
Muslim/Islamic
Brave
Boy/Male
Arabic, Australian
Smiling
Female
English
Variant spelling of English Belle, BELL means "beautiful."Â
Male
Hebrew
(סֶלַע) Hebrew name CELA means "a rock." In the Old Testament bible, this is the name of the capital city of Edom, possibly an early name for Petra.
Boy/Male
Muslim
Smiling
Surname or Lastname
Irish
Irish : reduced form of McCall.English : from Middle English calle ‘close-fitting cap for women’ (from Old French cale), probably applied as a metonymic occupational name. Compare Cale.Catalan : topographic name from call ‘narrow track’ (Latin callis). Compare Calle.Possibly an Americanized spelling of German Koll or Goll.
Surname or Lastname
Jewish (eastern Ashkenazic)
Jewish (eastern Ashkenazic) : nickname for a man with red hair, from Yiddish gel ‘red-headed’, Middle High German gel ‘yellow’, German gelb (see Geller).German : unexplained.English : from a short form of the personal name Julian.Variant of French Gille.
Surname or Lastname
English
English : variant of Hill, from southeastern Middle English hell ‘hill’, a dialect form characteristic of Kent and Sussex.English : from a personal name, Helle, which may have been a variant of Elie (a Middle English form of Elias), or perhaps a short form of a personal name formed with Hild- as the first element (see Hilliard for example), or perhaps from the female personal name Helen.German : nickname from Middle High German hell ‘bright’, ‘shining’.German : variant of Helle 3.
Surname or Lastname
English
English : from a reduced form of the personal name Nicholas.Scottish or Irish : reduced form of McColl.Catalan : topographic name from coll ‘mountain pass’, from Latin collis ‘hill’.Americanized spelling of German Koll or Kohl.
Girl/Female
British, English
Based
Surname or Lastname
English
English : from the Middle English personal name Pell, a pet form of Peter.English : metonymic occupational name for a dealer in furs, from Middle English, Old French pel ‘skin’.English : variant of Pill 1.German : variant of Pelle or, in some instances, a variant of Pfell, the South German form of this name, from Middle High German phelle(e) ‘purple silk cloth’.
CELL BASED-MODELS
CELL BASED-MODELS
Boy/Male
British, English
Violent
Girl/Female
Australian, Nigerian
Free Gift
Boy/Male
Arabic, Muslim
Slave of the Sustainer
Boy/Male
Hindu
Responsibilities, Duty
Boy/Male
Tamil
Glitter, Shine
Boy/Male
Hindu, Indian
Life Giving
Boy/Male
Gaelic Irish
Handsome; good-looking lad.
Girl/Female
Australian, Finnish
Stranger; Foreigner; Sunset; Hospitable
Boy/Male
Muslim
Happy
Girl/Female
Arabic, Australian, Greek
Princess; Aristocratic Lady
CELL BASED-MODELS
CELL BASED-MODELS
CELL BASED-MODELS
CELL BASED-MODELS
CELL BASED-MODELS
a.
Morally low. Hence: Low-minded; unworthy; without dignity of sentiment; ignoble; mean; illiberal; menial; as, a base fellow; base motives; base occupations.
n.
A rustic play; -- called also prisoner's base, prison base, or bars.
a.
Alloyed with inferior metal; debased; as, base coin; base bullion.
v. i.
To develop bells or corollas; to take the form of a bell; to blossom; as, hops bell.
v. t.
To put a bell upon; as, to bell the cat.
a.
Not held by honorable service; as, a base estate, one held by services not honorable; held by villenage. Such a tenure is called base, or low, and the tenant, a base tenant.
a.
Consisting of, or containing, cells; of or pertaining to a cell or cells.
n.
Same as Cella.
pl.
of Cello
a.
Reduced; lowered; restrained; as, to speak with bated breath.
imp. & p. p.
of Base
n.
A cell; a house.
v. t.
To pour forth, as from a well.
v. t.
To place or inclose in a cell.
n.
Wearing, or protected by, bases.
v. t.
To utter in a loud or distinct voice; -- often with off; as, to call, or call off, the items of an account; to call the roll of a military company.
a.
Containing a cell or cells.
v. t.
To make bell-mouthed; as, to bell a tube.
a.
Having a base, or having as a base; supported; as, broad-based.