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Controlling biological cells with light
Look up optogenetics in Wiktionary, the free dictionary. "Optogenetics: shedding light on the brain's secrets". Scientifica. "Optogenetics: Integrated
Optogenetics
American optogeneticist (born 1971)
optogenetics, and neural circuits of behavior Deisseroth named this field "optogenetics" in 2006 and followed up with the development of optogenetic technologies
Karl_Deisseroth
American neuroscientist
strategies for those suffering from addiction. Witten then wanted to apply optogenetics to rat models to explore neural reward circuitry, so she created Th::Cre
Ilana_B._Witten
Austrian neuroscientist (born 1965)
of optogenetics beyond the proof-of-principle stage. In 2015 he received the Heinrich Wieland Prize "for his breakthrough concept of optogenetics and
Gero_Miesenböck
American veterinarian and academic
to 2024. Since 1986, his academic research on cardiovascular biology, optogenetics, mouse genetics, and ion channel function has been funded by the National
Michael_Kotlikoff
Class of transport proteins
Science and Medicine for the development of optogenetics. Channelrhodopsins are key tools in optogenetics. The C-terminal end of Channelrhodopsin-2 extends
Channelrhodopsin
Chinese–American biochemist (born 1981)
Zhang is most well known for his central role in the development of optogenetics and CRISPR technologies. In 2025, he was awarded National Medal of Technology
Feng_Zhang
American neuroscientist (born 1979)
for his work on optogenetics and expansion microscopy. Boyden joined the MIT faculty in 2007, and continues to develop new optogenetic tools as well as
Edward_Boyden
American neuroscientist (born c. 1981)
Institute for Biological Sciences. Her research has focused on using optogenetics to identify connections in the brain that are involved in innate emotion
Kay_Tye
American neuroscientist
neurotransmitter release and his contributions to the development of optogenetics, a tool to control neural activity using light. He was the editor-in-chief
George_J._Augustine
Taiwanese-American biochemist and bioengineer
Stanford University has engineered proteins with novel functions for optogenetics, chemogenetics, and synthetic biology. Notable inventions include: Red
Michael_Z._Lin
Biochemical technique
Chemogenetics has recently been favored over optogenetics, and it avoids some of the challenges of optogenetics. Chemogenetics does not require the expensive
Chemogenetics
Optogenetics began with methods to alter neuronal activity with light, using e.g. channelrhodopsins. In a broader sense, optogenetic approaches also include
Optogenetic methods to record cellular activity
Optogenetic_methods_to_record_cellular_activity
Family of transmembrane proteins
U.S. National Library of Medicine Medical Subject Headings (MeSH) Optogenetics Resource Center OpenOptogenetics.org, an open wiki about optogenetics.
Halorhodopsin
German biophysicist
of optogenetics". Cell. 184 (21): 5266–5270. doi:10.1016/j.cell.2021.08.022. PMID 34562360. S2CID 237622465. Häusser, Michael (2021). "Optogenetics – The
Peter_Hegemann
Chinese-American neuroscientist
executive control."Dan uses the mouse as her model organism combined with optogenetics, imaging, virus-mediated circuit tracing, and electrophysiology. Dan
Yang_Dan_(neuroscientist)
German physicist
organic dyes, luminescent polymers, and photoreceptor proteins relevant to optogenetics. He is a Fellow of Optica (formerly the Optical Society of America).
Alfons_Penzkofer
Coenzyme
would be unlikely to interfere with the human FAD synthase enzymes. Optogenetics allows control of biological events in a non-invasive manner. The field
Flavin_adenine_dinucleotide
American neuroscientist
the University of California San Francisco. Gunaydin helped discover optogenetics in the lab of Karl Deisseroth and now uses this technique in combination
Lisa_Gunaydin
Class of proteins
(2015-01-20). "Controlling fertilization and cAMP signaling in sperm by optogenetics". eLife. 4 e05161. doi:10.7554/eLife.05161. ISSN 2050-084X. PMC 4298566
Photoactivated adenylyl cyclase
Photoactivated_adenylyl_cyclase
Medical treatment research
potassium channels and tools for on-demand suppression of excitability (optogenetics and chemogenetics).[citation needed] Adenosine is an inhibitory nucleoside
Gene_therapy_for_epilepsy
Calcium imaging technique
for imaging of multiple interacting brain regions and integration with optogenetics, electrophysiology and more systems-level neuroscience techniques. More
Fiber_photometry
American neuroscientist and biomedical engineer
California Institute of Technology. She develops neurotechnologies, including optogenetics CLARITY tissue clearing, and gene delivery vectors. She has been awarded
Viviana_Gradinaru
Neuroscientist
of relief for symptoms of mental health disorders through the use of optogenetics. Ramirez graduated from Boston University in 2010 and later earned his
Steve_Ramirez
Conjectured means by which memories are stored
on neurons affected by optogenetics, a long-term fear-related memory appears to be recalled. Another study used optogenetics and chemogenetics to control
Engram_(neuropsychology)
via the use of optogenetics as in the case of the chloride pump halorhodopsin which functions to hyperpolarize neurons. Before optogenetics can be performed
Photostimulation
Short-range wireless technology standard
Graeme; Degenaar, Patrick (2015). "Wireless data and power transfer of an optogenetic implantable visual cortex stimulator". 2015 37th Annual International
Bluetooth
Colour between violet and cyan on the visible spectrum of light
inefficient, but still widely used by scientists for applications including optogenetics, Raman spectroscopy, and particle image velocimetry, due to their superior
Blue
Set of neuroscience techniques
spinal cord through the use of imaging, immunohistochemistry, molecular & optogenetics, stem cell and cellular biology, engineering, neurophysiology and nanotechnology
Brain_mapping
American neuroscientist
specific optogenetics. Following this paper, Cardin and a team of researchers developed a protocol to both stimulate neurons optogenetically and record
Jessica_Cardin
Branches of science that involve the scientific study of life
key reagents used in optogenetics are light-sensitive proteins. Spatially-precise neuronal control is achieved using optogenetic actuators like channelrhodopsin
List_of_life_sciences
Study of neural function
investigate the function of specific receptors in neurons and glia. Optogenetics and chemogenetics allow specific activation of neurons to study their
Neurophysiology
Scientific study of the nervous system
neuroimaging (e.g., fMRI, PET, SPECT), EEG, MEG, electrophysiology, optogenetics and human genetic analysis combined with sophisticated experimental techniques
Neuroscience
Chinese neuroscientist (born 1956)
Chinese-American neuroscientist, known for his foundational contributions to optogenetics. He is the Edward T. and Ellen K. Dryer Endowed Professor of Ophthalmology
Zhuo-Hua_Pan
Photoluminescent particles
light. Moreover, the utilization of upconversion nanocrystal-mediated optogenetics has enabled the stimulation of deep-brain neurons in mouse brains. This
Upconverting_nanoparticles
Academic journal
Chief George J. Augustine wrote that the October 2008 special issue Optogenetic probes of neuronal function and circuitry "promises to be a landmark
Brain_Cell_Biology
American neuroscientist (born 1967)
to be known as optogenetics. These techniques were later improved by Karl Deisseroth in 2005; these pioneering studies in optogenetics led to these three
Boris_Zemelman
Bulgarian–American engineer and academic
optogenetics: a strategy to control biological processes using light. She was among the first scientists to extend the applications of optogenetics to
Emilia_Entcheva
with the discovery of channelrhodopsins, which opened the new field of optogenetics. Early in 1995, Georg Nagel and Ernst Bamberg demonstrated that a microbial
Georg_Nagel
Selective artificial removal of memories or associations from the mind
taken. A way of selectively erasing memories may be possible through optogenetics, a type of gene therapy that targets specific neurons. In 2017, researchers
Memory_erasure
Organ central to the nervous system
Gut–brain axis List of neuroscience databases Neurological disorder Optogenetics Outline of neuroscience Saladin, Kenneth (2011). Human anatomy (3rd ed
Brain
American academic
microstructure. Together with Karl Deisseroth, Delp pioneered the use of optogenetics to control activity in the peripheral nervous system leading to important
Scott_L._Delp
Family of archaea
archaerhodopsins. Mutants of Archaerhodopsin-3 (AR3) are used as tools in optogenetics for neuroscience research. The term archaerhodopsin is a portmanteau
Archaerhodopsin
Hypothesis that reality could be a computer simulation
Intelligence amplification Isolated brain Neuroprosthetics Neurotechnology Optogenetics Sensory substitution Stentrode Synthetic telepathy Scientific phenomena
Simulation_hypothesis
Academic journal
transcranial direct-current stimulation, ultrasound neuromodulation, and optogenetics. The journal is abstracted and indexed in: BIOSIS Previews Biological
Brain_Stimulation_(journal)
Russian-American Biophysicist, academic and researcher
lipidation) in modulating toxic oligomer nucleation. 3. Protein Engineering, Optogenetics, and Cell Logic Circuits In collaboration with experimental biologists
Nikolay_Dokholyan
Annual science award
Laureates 2022 Hofschneider, Mark. "Light-sensitive microbial proteins and optogenetics". Lasker Foundation. Retrieved 13 December 2021. Hofschneider, Mark.
Albert Lasker Award for Basic Medical Research
Albert_Lasker_Award_for_Basic_Medical_Research
light-gated ion channels to turn on cell firing and these are part of optogenetic induction models of epilepsy. Sarkisian, Matthew R. (31 May 2001). "Overview
Animal_models_of_epilepsy
Biotechnology company
emerging field of optogenetics and retinal coding. Through the collaboration, AGTC and Bionic Sight will to develop a new optogenetic therapy that leverages
Applied Genetic Technologies Corporation
Applied_Genetic_Technologies_Corporation
Branch of neuroscience
viral vectors, pharmacology, in vitro and in vivo electrophysiology, optogenetics, in vivo imaging, and behavioral analysis. Modeling has become an essential
Molecular_cellular_cognition
MRI procedure that measures brain activity by detecting associated changes in blood flow
same task. More recent characterization of the BOLD signal has used optogenetic techniques in rodents to precisely control neuronal firing while simultaneously
Functional magnetic resonance imaging
Functional_magnetic_resonance_imaging
Structure at the rear of the vertebrate brain, beneath the cerebrum
Medina JF (February 2014). "Precise control of movement kinematics by optogenetic inhibition of Purkinje cell activity". Journal of Neuroscience. 34 (6):
Cerebellum
Color between orange and green on the visible spectrum of light
and 594 nm have recently become more widespread thanks to the field of optogenetics. Stars of spectral classes F and G have color temperatures that make
Yellow
Model for the development of seizures
a new model to develop kindling in the neocortex was developed using optogenetics (light) instead of passing electrical current. In 2021, "optokindling"
Kindling_model_of_epilepsy
Periodic rectangular waveform
on nociception and neuropathic pain and for diagnosing neuropathies. Optogenetics utilizes light pulses to control the activity of genetically modified
Pulse_wave
Ability to switch thinking about two concepts
functional magnetic resonance imaging (fMRI) and animal studies using optogenetics have shown that cognitive flexibility relies on a variety of distinct
Cognitive_flexibility
Protein
PMID 29108650. Adam Y, Kim JJ, Lou S, et al. (2019). "Voltage imaging and optogenetics reveal behaviour-dependent changes in hippocampal dynamics". Nature.
Genetically encoded voltage indicator
Genetically_encoded_voltage_indicator
Interdisciplinary branch of biology and engineering
of applications in biocomputing, bioenergy, biofuels, bioremediation, optogenetics, and medicine, it involves the standardisation of DNA components, engineering
Synthetic_biology
Chemical substance that enables neurotransmission
1521238113. PMC 4791010. PMID 26831103. Previous work has demonstrated that optogenetically stimulating D1 MSNs promotes reward, whereas stimulating D2 MSNs produces
Neurotransmitter
Region of the basal forebrain
the nucleus accumbens as well, but evidence from pharmacological and optogenetics studies is conflicting. Furthermore, a subset of NAcc MSNs express both
Nucleus_accumbens
Study of biological and neural mechanisma in behaviour
or Proton pumps are the two classes of proteins used for inhibitory optogenetics, achieving inhibition by increasing cytoplasmic levels of halides (Cl−
Behavioral_neuroscience
Group of neural structures responsible for motivation and desire
also lie in the heterogenous functionality of reward related regions. Optogenetic stimulation of the mPFC as a whole produces antidepressant effects. This
Reward_system
Overview of and topical guide to brain mapping
endoscopic and multi-modality imaging), immunohistochemistry, molecular and optogenetics, stem cell and cellular biology, engineering (material, electrical and
Outline_of_brain_mapping
Species of alga
proteins and others like them are increasingly widely used in the field of optogenetics. The genome of C. reinhardtii is significant for mitochondrial study
Chlamydomonas_reinhardtii
Open question in philosophy of how abstract minds interact with physical bodies
K.; de Lecea L. (2007). "Neural substrates of awakening probed with optogenetic control of hypocretin neurons". Nature. 450 (7168): 420–4. Bibcode:2007Natur
Mind–body_problem
Fighting, Fleeing, Feeding and Fucking
nerve cells operate so intimately that signals may get misinterpreted. Optogenetic stimulation of the ventromedial hypothalamus in male mice resulted in
Four_Fs_(evolution)
Gene editing method
F, Nakajima T, Sato M (July 2015). "Photoactivatable CRISPR-Cas9 for optogenetic genome editing". Nature Biotechnology. 33 (7): 755–760. doi:10.1038/nbt
CRISPR_gene_editing
Technology that interfaces with the nervous system to monitor or modify neural function
Wu, X. et al. Sono-optogenetics facilitated by a circulationdelivered rechargeable light source for minimally invasive optogenetics. Proc. Natl. Acad.
Neurotechnology
Mirror-based electronic display technology
Modulation Multivariate optical computing Digital Holographic Tomography Optogenetics Flip-disc display US patent 3746911, Nathanson et al, "Electrostatically
Digital_micromirror_device
Autoimmune disease resulting in skeletal muscle weakness
Goldstein PA, Studer L (January 2016). "Functional Connectivity under Optogenetic Control Allows Modeling of Human Neuromuscular Disease". Cell Stem Cell
Myasthenia_gravis
Portuguese neuroscientist
Gero Miesenböck’s lab. She spent five years researching and developing optogenetics, a research technique that uses light to activate a single neuron in
Susana_Lima
Swiss multinational pharmaceutical corporation
would acquire gene-therapy business, Arctos Medical, broadening its optogenetics range. In December, Novartis announced it would purchase Gyroscope Therapeutics
Novartis
Form of programmed cell death
PMID 9989411. S2CID 204991081. Jewhurst K, Levin M, McLaughlin KA (2014). "Optogenetic Control of Apoptosis in Targeted Tissues of Xenopus laevis Embryos".
Apoptosis
Vertebrate brain region
neurons have also been demonstrated as critical for social memory under optogenetic control in mice. In the early 20th century, the widely held view was
Hippocampus
Faculty of mind to store and retrieve data
prior memories and artificially implant false memories in mice. Using optogenetics, a team of RIKEN-MIT scientists caused the mice to incorrectly associate
Memory
Paired structure within the brain temporal lobe
1093/scan/nsv153. PMC 4847692. PMID 26755769. Lalumiere RT (2014). "Optogenetic dissection of amygdala functioning". Frontiers in Behavioral Neuroscience
Amygdala
Gradual retinal degeneration leading to progressive sight loss
pigmentosa, based on the evidence available at that time. In 2021 an optogenetics application of the protein Channelrhodopsin in a human patient was reported
Retinitis_pigmentosa
Cluster of interneurons in the medulla oblongata
light-sensitive cation channels (channelrhodopsin 2) in Dbx1-derived neurons, optogenetic photostimulation speeds up breathing and increases tidal volume of the
Pre-Bötzinger_complex
German cellular and molecular neurobiologist
PMC 4569695. PMID 26345128. "Next Generation Optogenetics: DFG Schwerpunktprogramm SPP 1926Next Generation Optogenetics". DFG Schwerpunktprogramm SPP 1926. Retrieved
Alexander_Gottschalk
Indian-American neurosurgeon and writer (1977–2015)
PMID 23551457. S2CID 46274667. Kalanithi, P. S.; Henderson, J. M. (2012). "Optogenetic Neuromodulation". Emerging Horizons in Neuromodulation – New Frontiers
Paul_Kalanithi
Branch of neuroscience
the local connections or mutual arrangement (tiling) between neurons. Optogenetics uses transgenic constitutive and site-specific expression (normally in
Neuroanatomy
Canadian Neuroscientist
used like optogenetics to cause synaptic level and behavioral changes in mice, a finding that increases the translational potential of optogenetic studies
Meaghan_Creed
Bilateral pathway in the brain
Anatol C. (2010-07-29). "Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry". Nature. 466 (7306): 622–626. Bibcode:2010Natur
Nigrostriatal_pathway
new DNA synthesis by recording light exposure into bacterial DNA via optogenetic circuits. The 'biological camera' extends chemical and electrical interface
2023_in_science
French neurologist
of the Eighth Annual Deep Brain Stimulation Think Tank: Advances in Optogenetics, Ethical Issues Affecting DBS Research, Neuromodulatory Approaches for
Patricia_Limousin
Manipulation of cells using magnetic fields
with genetics (e.g. optogenetics, chemogenetics, etc.), and each technology has strengths and limits. For example, optogenetics has advantages in that
Magnetogenetics
Series of neuroscience books published by Elsevier
Progress in Brain Research Cover of volume 196, Optogenetics, 2012 Edited by Stephen Waxman, Donald G. Stein, Dick Swaab, Howard Fields Language English
Progress_in_Brain_Research
American scientist and educator
molecular behavior inside living cells, especially fluorescent biosensors, optogenetics and chemogenetics. Hahn earned his B.S in biochemistry and philosophy
Klaus_Hahn_(cell_biologist)
US-based non-profit biomedical association
endoscopic and multi-modality imaging), immunohistochemistry, molecular & optogenetics, stem cell and cellular biology, engineering (material, electrical and
Society for Brain Mapping and Therapeutics
Society_for_Brain_Mapping_and_Therapeutics
Japanese scientist (1939–2026)
of FXS symptoms in the mouse model. Tonegawa was an early adopter of optogenetics and biotechnology in neuroscience research, leading to his groundbreaking
Susumu_Tonegawa
American neuroscientist
Italy-based biotechnology company OptogeniX, which sells equipment for optogenetics studies. Sabatini's work has contributed to understanding the biochemical
Bernardo_L._Sabatini
Cutaneous receptor in the human eye
remained unknown. Recently optogenetic studies revealed their role in sexual stimulation and mating behavior in mice: "Optogenetic activation of male Krause
Bulboid_corpuscle
presynaptic terminals by fluorescence microscopy. GluSnFRs are a class of optogenetic sensors used in neuroscience research. In brain tissue, two-photon microscopy
Glutamate-sensitive fluorescent reporter
Glutamate-sensitive_fluorescent_reporter
Distinct, flexible appendage to the torso of an animal
spinal cord and can directly contact tail motor neurons. Experimental optogenetic activation of this pathway showed that tail movements were most strongly
Tail
Brain structures in the forebrain
RE; Hussain Shuler, MG; Petersen, CC; Kepecs, A (14 October 2015). "Optogenetic Dissection of the Basal Forebrain Neuromodulatory Control of Cortical
Basal_forebrain
Genus of archaea
is used for ATP synthesis. Mutants of AR3 are widely used as tools in optogenetics for neuroscience research. Halorubrum tibetense was first isolated from
Halorubrum
American neuroscientist and author
research methods such as computational modeling, in vitroelectrophysiology, optogenetics, and human psychophysics to conduct research observing how individual
Dean_Buonomano
Medical intervention
H.; Kreitzer, Anatol C. (July 2019). "Thermal constraints on in vivo optogenetic manipulations". Nature Neuroscience. 22 (7): 1061–1065. doi:10.1038/s41593-019-0422-3
Transcranial focused ultrasound
Transcranial_focused_ultrasound
2016 (ISBN 978-1467757843). "Lighting Up the Brain: The Science of Optogenetics." Twenty First Century Books, Minneapolis, 2018 (ISBN 978-1512427523)
Marc_Zimmer
Topics referred to by the same term
basic pattern Arch, the protein archaerhodopsin-3, used for research in optogenetics Arch Linux, a Linux distribution GNU arch, a distributed revision control
Arch_(disambiguation)
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