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Field of study
remodeling. Epigenomics shares many commonalities with other genomics fields, in both methodology and in its abstract purpose. Epigenomics seeks to identify
Epigenomics
attainable fashion before added to the Epigenomics database. All of the experiments and corresponding samples in the Epigenomics database are displayed in the
NCBI_Epigenomics
Epigenomics AG is a molecular diagnostics company headquartered in Berlin, Germany with a wholly owned subsidiary, Epigenomics Inc. based in Seattle, WA
Epigenomics_AG
Study of DNA modifications that do not change its sequence
universally accepted and are still subject to debate. The NIH "Roadmap Epigenomics Project", which ran from 2008 to 2017, uses the following definition:
Epigenetics
Global research organization
International Human Epigenomics Consortium (IHEC) was launched in 2010 to coordinate global efforts in the field of epigenomics. IHEC aims to generate
International Human Epigenomics Consortium
International_Human_Epigenomics_Consortium
Academic journal
Epigenomics is a peer-reviewed medical journal established in 2009 and published by Future Medicine. The editors-in-chief are James G. Herman (University
Epigenomics_(journal)
Study of epigenomics in individual cells by single cell sequencing
Single cell epigenomics is the study of epigenomics (the complete set of epigenetic modifications on the genetic material of a cell) in individual cells
Single_cell_epigenomics
Molecular biology technique
"Droplet-based combinatorial indexing for massive scale single-cell epigenomics". bioRxiv 10.1101/612713. Chen X, Miragaia RJ, Natarajan KN, Teichmann
ATAC-seq
Greek-born computational biologist
genetics, epigenomics, gene regulation, genome evolution, disease mechanism, and single-cell genomics. He co-led the NIH Roadmap Epigenomics Project effort
Manolis_Kellis
Biological term
NCBI Epigenomics Hub NCBI Gene Expression Omnibus Epigenomics The Human Epigenome Atlas Roadmap Epigenomics Visualization Hub Roadmap Epigenomics Visualization
Epigenome
modifications and -omics data (including transcriptomics, genomics, epigenomics, and proteomics) to gain a comprehensive understanding of biological
Computational_epigenetics
Database branch of the US National Library of Medicine
database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are available online through the Entrez
National Center for Biotechnology Information
National_Center_for_Biotechnology_Information
Italian American epigeneticist and clinical endocrinologist
contributions in the field of epigenetics, mitochondriomics, and computational epigenomics, with a research focus on investigating the impact of environmental exposures
Andrea_Baccarelli
Suffix in biology
binders, alternative DNA structures, and chemical modifications on DNA. Epigenomics: Modern technologies include chromosome conformation by Hi-C, various
Omics
Discipline in genetics
bioinformatics, i.e. determining protein function from its 3D structure. Epigenomics is the study of the complete set of epigenetic modifications on the genetic
Genomics
Cancer of the colon or rectum
reductions in DNA repair enzyme expression may likely lead to the genomic and epigenomic instability characteristic of cancer. As summarized in the articles Carcinogenesis
Colorectal_cancer
Compounds that inhibit histone deacetylases
heterochromatin, HDIs can render chromatin more transcriptionally active and induce epigenomic changes. HDIs have a long history of use in psychiatry and neurology as
Histone_deacetylase_inhibitor
Biologist (born 1970)
Harvard Medical School in 2005. In 2009, he and Alex Meissner launched the Epigenomics Program at the Broad Institute. In 2021, he moved to the Dana–Farber
Bradley_Bernstein
American physician
Stamatoyannopoulos a Greek-American physician-scientist in molecular biology and epigenomics. He was a professor of genome sciences and medicine at the University
John_Stamatoyannopoulos
American geneticist and biophysicist (born 1979)
patent US10619207B2, "Transposition into native chromatin for personal epigenomics", issued April 14, 2020, assigned to The Board of Trustees of the Leland
William Greenleaf (American scientist)
William_Greenleaf_(American_scientist)
Biochemical test for age
hypothesized that his clock arises from a methylation footprint left by an epigenomic maintenance system. Endogenous DNA damages occur frequently including
Epigenetic_clock
Types of irreversible biochemical changes
inaccessible, and which ones are unspooled and available for transcription (epigenomic factors). Depending on the needs of the specific tissue type and environment
Hallmarks_of_aging
Kenyan-British developmental biologist
the University of Cambridge since 1992, and Director of Germline and Epigenomics Research since 2013. Surani was educated at Plymouth University (BSc)
Azim_Surani
American biologist, writer, and blogger (born 1967)
(1967-04-10) April 10, 1967 (age 59) Awards Howard Temin Award Scientific career Fields Stem cells, Cancer Biology, Epigenomics Website www.chromatin.com
Paul_Knoepfler
Mental disorder with psychotic symptoms
20030340. PMC 8222104. PMID 33397140. Khavari B, Cairns MJ (August 2020). "Epigenomic Dysregulation in Schizophrenia: In Search of Disease Etiology and Biomarkers"
Schizophrenia
Vertebrate brain region
Kennedy AJ, Gavin CF, Day JJ, Sweatt JD (July 2017). "Experience-dependent epigenomic reorganization in the hippocampus". Learning & Memory. 24 (7): 278–288
Hippocampus
Molecular biology sequencing technique
molecular biology multiplexed sequencing assay capturing genomic and epigenomic information for individual chromatin fibers. It achieves this by combining
Fiber-Seq
Psychoactive component of cannabis
PMID 19370677. Reece AS, Hulse GK (July 2016). "Chromothripsis and epigenomics complete causality criteria for cannabis- and addiction-connected carcinogenicity
Tetrahydrocannabinol
Primary cell of the nervous system
He Y, Jin P (March 2016). "DNA methylation dynamics in neurogenesis". Epigenomics. 8 (3): 401–14. doi:10.2217/epi.15.119. PMC 4864063. PMID 26950681. Orii
Neuron
and other DNA binding factors that influence DNA function. By "editing" epigenomic features in this manner, researchers can determine the exact biological
Epigenome_editing
Genomics academic journal
evolution, genome-scale quantitative and population genetics, proteomics, epigenomics, and systems biology, genomic medicine, and single-cell analysis. New
Genome_Research
Hong Kong Epigenomics Project as new member to the consortium | IHEC". ihec-epigenomes.org. Retrieved 2017-06-23. "The Hong Kong Epigenomics Project".
International Human Epigenome Consortium
International_Human_Epigenome_Consortium
Russian-American neuroscientist
neuroscience, comparative & evolutionary neurobiology, genomics and epigenomics, learning and memory and working in characterize basic mechanisms underlying
Leonid_Moroz
Group of ethnicities native to Central Africa
Rotival, Maxime; Flutre, Timothée; Jones, Meaghan J; et al. (2015). "The epigenomic landscape of African rainforest hunter-gatherers and farmers". Nature
African_Pygmies
Loose connective tissue composed mostly by adipocytes
organization of the genome in subcutaneous adipose tissue. Single‑cell epigenomic studies have shown that many genetic variants associated with abdominal
Adipose_tissue
Gene editing method
and other DNA binding factors that influence DNA function. By "editing" epigenomic features in this manner, researchers can determine the exact biological
CRISPR_gene_editing
Form of diabetes mellitus
Natarajan R, Patti ME, Sallari R, Sander M, et al. (2018). "Epigenetics and Epigenomics: Implications for Diabetes and Obesity". Diabetes. 67 (10): 1923–1931
Type_2_diabetes
American educator (born 1930)
February 26, 2024. "Gottesmans Give $25 Million to Support Stem Cell and Epigenomic Research and Clinical Skills Training at Medical School". Yeshiva University
Ruth_Gottesman
Calendar year
Memory of Alfred Nobel – Robert Mundell blog carbon footprint dashcam epigenomics metabolomics texting vape Includes a victim who died in 2025 from injuries
1999
Oldest cultured human cell line (1951)
epigenome were published in August 2013. Karyotypic, microarray, genomic, epigenomic, and transcriptomic data have allowed researchers to appreciate the scale
HeLa
Chemical process in which a methyl (CH3) group is covalently attached to a molecule
(November 2009). "Human DNA methylomes at base resolution show widespread epigenomic differences". Nature. 462 (7271): 315–22. Bibcode:2009Natur.462..315L
Methylation
Long-term inflammatory disease of the airways of the lungs
allergens, air pollution, and respiratory infections. Integrative genomic and epigenomic studies show enrichment of risk alleles in enhancers active in airway
Asthma
Biomedical and genomic research center
Psychiatric Research at Broad Institute Genome Sequencing and Analysis Program Epigenomics Program Vertebrate Genomics Program The Broad Institute's platforms are
Broad_Institute
Biological entity that causes disease in its host
PMID 32417228. Oliveira PH, Ribis JW, Garrett EM, et al. (January 2020). "Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase
Pathogen
Swiss academic publisher of open access journals
Health Frontiers in Environmental Science Frontiers in Epigenetics and Epigenomics Frontiers in Ethology Frontiers in Evolutionary Neuroscience Frontiers
Frontiers_Media
Faculty of mind to store and retrieve data
Kennedy AJ, Gavin CF, Day JJ, Sweatt JD (July 2017). "Experience-dependent epigenomic reorganization in the hippocampus". Learn Mem. 24 (7): 278–288. doi:10
Memory
Indian structural biologist (born 1968)
Board". Bionivid. 2016. Retrieved 2 November 2016. "Asian Epigenomics 2016". Asian Epigenomics 2016. 2016. Retrieved 2 November 2016. "Editorial Board"
Shantanu_Chowdhury
Lab procedure detecting 5-methylcytosines in DNA
S2CID 19574628. Callinan PA, Feinberg AP (April 2006). "The emerging science of epigenomics". Human Molecular Genetics. 15 Spec No 1 (90001): R95-101. doi:10.1093/hmg/ddl095
Bisulfite_sequencing
Molecular biologist
organization and gender equity in research: an interview with Susan Gasser". Epigenomics. 14 (6): 331–337. doi:10.2217/epi-2022-0063. PMID 35259924. EMBO Annual
Susan_M._Gasser
Biological process
serovar Paratyphi A str. ATCC 9150" Oliveira PH (August 2021). "Bacterial Epigenomics: Coming of Age". mSystems. 6 (4) 10.1128/msystems.00747-21: e0074721
DNA_methylation
Academic journal
editor-in-chief is Rabia Begum. The journal comprises six sections: 1) Genomics & epigenomics of disease, 2) Pharmacogenomics & personalized medicine, 3) Genomic epidemiology
Genome_Medicine
U.S. biomedical research center
researchers study aging, cancer, induced pluripotent stem cell science, epigenomics, pharmacogenomics and more. The Institute ranks among the top 10 institutions
Coriell Institute for Medical Research
Coriell_Institute_for_Medical_Research
American biologist
structure-function relationships of plant cells. She established the Epigenomics of Plants International Consortium. Wagner is a Fellow of the American
Doris_Wagner_(scientist)
Catalan supercentenarian (1907–2024)
her genomic, transcriptomic, metabolomic, proteomic, microbiomic and epigenomic landscapes in different tissues, and compared the results with those observed
Maria_Branyas
Application of computer science in biology
methods and via large consortia projects such as ENCODE and the Roadmap Epigenomics Project. [obsolete source] Understanding how individual genes contribute
Computational_biology
Medical condition
of genetic and epigenetic alterations in hepatocellular carcinoma". Epigenomics. 8 (7): 993–1005. doi:10.2217/epi-2016-0027. PMID 27411963. "Drinking
Liver_disease
Large-scale study of proteins
proteomics can be seen as complementary to genomics, transcriptomics, epigenomics, metabolomics, and other -omics approaches in integrative analyses attempting
Proteomics
Histone methylation on tail of histone H3 associated with gene bodies
M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, et al. (Roadmap Epigenomics Consortium) (February 2015). "Integrative analysis of 111 reference human
H3K9me3
bisulfite sequencing has become increasingly promising in aiding fundamental epigenomics research, novel hypotheses on DNA methylation, and investigations of
Whole genome bisulfite sequencing
Whole_genome_bisulfite_sequencing
Chinese-American reproductive biologist
S2CID 19089262. Epigenomics, National Center for Reproductive. "National Center for Reproductive Epigenomics". National Center for Reproductive Epigenomics. Wang
Wei_Yan_(biologist)
Canadian biostatistician
Génome Québec for their research into precision medicine in cellular epigenomics. Greenwood has published over 400 academic publications, which have been
Celia_Greenwood
Topics referred to by the same term
neuro-electric monitoring technique Single-cell sequencing Single cell epigenomics Single-cell transcriptomics, a technique in molecular biology Single-cell
Single_cell
American developmental neurobiologist and psychiatrist
axon pathfinding and synapse development. His more recent work uses epigenomics to identify human and mouse genomic regulatory elements (enhancers) that
John_Rubenstein
British sociologist
imprinted brain: how genes set the balance between autism and psychosis". Epigenomics. 3 (3): 345–359. doi:10.2217/epi.11.19. ISSN 1750-192X. PMID 22122342
Christopher_Badcock
American computer scientist
new machine learning solutions for 3D genome organization, single-cell epigenomics, spatial omics, and complex molecular interactions. His lab also explores
Jian Ma (computational biologist)
Jian_Ma_(computational_biologist)
Database and Analysis Pipeline to Facilitate Integrative and Comparative Epigenomics". PLOS ONE. 8 (12) e81148. Bibcode:2013PLoSO...881148S. doi:10.1371/journal
MethBase
American biostatistician and data scientist
research involves the development of open-source software for genomics, epigenomics, and spatial transcriptomics, and applications involving single-cell
Stephanie_Hicks
National University Hospital in 2013. Foo's lab was the first to publish an epigenomic map of the failing human heart in 2011.[citation needed] In 2017, his
Roger_Foo
American geneticist
laboratory has also released 12 open-source software packages in genomics, epigenomics, metagenomics, and machine learning (methylKit, r-make, MeRiPPeR, eDMR
Christopher_E._Mason
Examines sequence information from individual cells
Human Cell Atlas Disease Cell Atlas Single-cell analysis Single-cell epigenomics Single-cell transcriptomics Single-cell multi-omics integration Tcr-seq
Single-cell_sequencing
Complex of DNA and protein in eukaryotic cells
(2013-12-01). "Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position"
Chromatin
gene nomenclature International Human Epigenome Consortium: integrates epigenomic reference data from well-known national endeavors such as the Canadian
List_of_biological_databases
Transformation of a stem cell to a more specialized cell
question can be seen in the 2011 paper by Lister R, et al. on aberrant epigenomic programming in human induced pluripotent stem cells. As induced pluripotent
Cellular_differentiation
Biological cell regulation mechanisms
Kennedy AJ, Gavin CF, Day JJ, Sweatt JD (July 2017). "Experience-dependent epigenomic reorganization in the hippocampus". Learning & Memory. 24 (7): 278–288
Regulation_of_gene_expression
Canadian-American mitochondrial psychobiologist
at the University of Pennsylvania in the Center for Mitochondrial and Epigenomic Medicine, where his work examined mitochondrial genetics, epigenetics
Martin_Picard_(scientist)
and "disease, genetic syndromes, immunity, cardiovascular disease, and epigenomics." "Monographs Editor: Manel Esteller". Genes & Cancer. 2 (6): 603. June
Manel_Esteller
DNA barcoding technique
spatial epigenomics". AtlasXomics. Retrieved 2025-11-13. "AtlasXomics and EpiCypher announce partnership to commercialize spatial epigenomics assays"
Deterministic Barcoding in Tissue for Spatial Omics Sequencing
Deterministic_Barcoding_in_Tissue_for_Spatial_Omics_Sequencing
Genomic technique
histone modifiers. ChIP is crucial for the advancements in the field of epigenomics and learning more about epigenetic phenomena. Briefly, the conventional
Chromatin_immunoprecipitation
Pluripotent stem cell generated directly from a somatic cell
Hawkins RD, Nery JR, Hon G, et al. (March 2011). "Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells". Nature. 471 (7336):
Induced_pluripotent_stem_cell
Kosovan activist and doctor (born 1970)
stress disorder on offspring epigenetic patterns and cortisol levels". Epigenomics. 13 (12): 967–980. doi:10.2217/epi-2021-0015. hdl:10536/DRO/DU:30166325
Feride_Rushiti
Removal of a methyl group from nucleotides in DNA
PMID 32238836. Ehrlich M (December 2009). "DNA hypomethylation in cancer cells". Epigenomics. 1 (2): 239–59. doi:10.2217/epi.09.33. PMC 2873040. PMID 20495664. Pfeifer
DNA_demethylation
British medical researcher
Biology in Shanghai, where he was a professor in Computational Systems Epigenomics from 2013 to 2020. Since 2020, he has been a professor and principal
Andrew_Teschendorff
Analyzing the genes of stem cells
being safety tested. Included in the study of stem cell genomics, is epigenomics, genomic-scale studies on chromatin regulatory variation. These studies
Stem_cell_genomics
Process of copying a segment of DNA into RNA
(2015). "Methyl-CpG-binding domain proteins: readers of the epigenome". Epigenomics. 7 (6): 1051–73. doi:10.2217/epi.15.39. PMID 25927341. Vaquerizas JM
Transcription_(biology)
Protein-coding gene in the species Homo sapiens
analysis of DNA methylation reveals a rectal cancer-specific epigenomic signature". Epigenomics. 8 (9): 1193–1207. doi:10.2217/epi-2016-0044. hdl:2318/1765144
BPIFB6
Method used to analyze protein interactions with DNA
repository. CUT&Tag for efficient epigenomic profiling of small samples and single cells CUT&Tag for efficient epigenomic profiling of small samples and
CUT&Tag_sequencing
the University of Cambridge since 1992, and Director of Germline and Epigenomics Research since 2013. Saeed Vaseghi – professor at Brunel University Abdul
List_of_British_Muslims
Biology Plant Genetics Plant Systems Biology Population Epigenetics and Epigenomics Protein Modelling Proteomics and Bioanalytics Reproductive Biotechnology
TUM_School_of_Life_Sciences
Damage in DNA which occurs naturally
Kennedy AJ, Gavin CF, Day JJ, Sweatt JD (July 2017). "Experience-dependent epigenomic reorganization in the hippocampus". Learning & Memory. 24 (7): 278–288
DNA damage (naturally occurring)
DNA_damage_(naturally_occurring)
Research institute in Berlin, Germany
Arndt) Otto Warburg Laboratories Quantitative RNA Biology (Tugce Aktas) Epigenomics (Ho-Ryun Chung) RNA Bioinformatics (Annalisa Marsico) Nascent Transcription
Max Planck Institute for Molecular Genetics
Max_Planck_Institute_for_Molecular_Genetics
organizations:[citation needed] The Wellcome Trust Sanger Institute — UK Epigenomics AG — Germany/USA The Centre National de Génotypage — France Epigenome
Human_Epigenome_Project
American geneticist
and became the founding director of the Center for Mitochondrial and Epigenomic Medicine at the Children's Hospital of Philadelphia. In June 2022 he was
Douglas_C._Wallace
American geneticist
two books on Environmental Epigenomics in Health and Disease. Jirtle is on the editorial board of the journals Epigenomics published by Taylor & Francis
Randy_Jirtle
Species of amphibian
VS, Burns KA, Wang DZ, Fisher ME, et al. (2018). "Xenbase: a genomic, epigenomic and transcriptomic model organism database". Nucleic Acids Research. 46
African_clawed_frog
Genus of amphibians
Burns KA, Wang DZ, Fisher ME, et al. (January 2018). "Xenbase: a genomic, epigenomic and transcriptomic model organism database". Nucleic Acids Research. 46
Xenopus
Self-interacting genomic region
Clark SJ (January 2017). "Disruption of the 3D cancer genome blueprint". Epigenomics. 9 (1): 47–55. doi:10.2217/epi-2016-0111. PMID 27936932. Spielmann M
Topologically associating domain
Topologically_associating_domain
Australian academic
transitioning from genetics-based single-gene approaches to genomics, and to epigenomics. He has retained an emphasis on developmental problems and exploited
Ryszard_Maleszka
Academic journal
reproducibility. 2013 Single-cell sequencing Genomic, transcriptomic and epigenomic profiling at the resolution of individual cells. 2014 Light sheet fluorescence
Nature_Methods
Process of storage and retrieval memory
Kennedy, AJ; Gavin, CF; Day, JJ; Sweatt, JD (2017). "Experience-dependent epigenomic reorganization in the hippocampus". Learn Mem. 24 (7): 278–288. doi:10
Long-term_memory
Histone acetylation on tail of histone H3
M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, et al. (Roadmap Epigenomics Consortium) (February 2015). "Integrative analysis of 111 reference human
H3K23ac
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EPIGENOMICS
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