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NMETH

  • Nature Methods
  • Academic journal

    6 (1): 1. 2009. doi:10.1038/nmeth.f.244. "Method of the Year 2009". Nature Methods. 7 (1): 1. 2010. doi:10.1038/nmeth.f.294. "Method of the Year 2010"

    Nature Methods

    Nature_Methods

  • Machine learning
  • Subset of artificial intelligence

    versus Machine Learning". Nature Methods. 15 (4): 233–234. doi:10.1038/nmeth.4642. PMC 6082636. PMID 30100822. Hung et al. Algorithms to Measure Surgeon

    Machine learning

    Machine_learning

  • Atherosclerosis
  • Inflammatory disease involving a buildup of lesions in the walls of arteries

    in histological sections". Nature Methods. 10 (2): 171–177. doi:10.1038/nmeth.2332. PMC 3560316. PMID 23314172. Wang Y, Dubland JA, Allahverdian S, Asonye

    Atherosclerosis

    Atherosclerosis

    Atherosclerosis

  • Color blindness
  • Decreased ability to see color or color differences

    (June 2011). "Color blindness". Nature Methods. 8 (6): 441. doi:10.1038/nmeth.1618. PMID 21774112. S2CID 36690778. Neitz J, Neitz M (April 2011). "The

    Color blindness

    Color blindness

    Color_blindness

  • Escherichia coli
  • Rod-shaped, gram-negative bacterium

    spectrometry-based proteomics". Nature Methods. 15 (3): 187–190. doi:10.1038/nmeth.4580. hdl:1874/362159. PMID 29377012. S2CID 3367416. Arifuzzaman M, Maeda

    Escherichia coli

    Escherichia coli

    Escherichia_coli

  • Optogenetics
  • Controlling biological cells with light

    24–25. doi:10.1038/nmeth.f.323. S2CID 5808517. Editorial: "Method of the Year 2010". Nature Methods. 8 (1): 1. 2010. doi:10.1038/nmeth.f.321. Commentary:

    Optogenetics

    Optogenetics

  • Nicotine
  • Chemical stimulant produced by some plants

    nicotinic optopharmacology". Nature Methods. 15 (5): 347–350. doi:10.1038/nmeth.4637. PMC 5923430. PMID 29578537. Holliday R, Preshaw PM, Ryan V, Sniehotta

    Nicotine

    Nicotine

    Nicotine

  • Immortalised cell line
  • Lineage of cells that evades senescence and continues dividing

    Collection, Technology Features" (Nov 2014)). 11 (5): 483–8. doi:10.1038/nmeth.2932. PMID 24781320. S2CID 205422738. Neimark J (February 2015). "Line of

    Immortalised cell line

    Immortalised cell line

    Immortalised_cell_line

  • Super-resolution microscopy
  • Series of techniques in optical microscopy

    unravels the interior of cells". Nature Methods. 5 (6): 539–44. doi:10.1038/nmeth.1214. hdl:11858/00-001M-0000-0012-DBBB-8. PMID 18488034. S2CID 16580036

    Super-resolution microscopy

    Super-resolution_microscopy

  • Light sheet fluorescence microscopy
  • Fluorescence microscopy technique

    multiview light-sheet microscopy". Nature Methods. 9 (7): 755–763. doi:10.1038/nmeth.2062. ISSN 1548-7091. PMID 22660741. S2CID 14191130.(subscription required)

    Light sheet fluorescence microscopy

    Light sheet fluorescence microscopy

    Light_sheet_fluorescence_microscopy

  • UpSet plot
  • Data visualization method

    2022. Lex, Alexander; Gehlenborg, Nils (1 August 2014). "Sets and intersections". Nature Methods. 11 (8): 779. doi:10.1038/nmeth.3033. S2CID 39124565.

    UpSet plot

    UpSet plot

    UpSet_plot

  • RNA-Seq
  • Lab technique in cellular biology

    mammalian transcriptomes by RNA-Seq". Nature Methods. 5 (7): 621–8. doi:10.1038/nmeth.1226. PMID 18516045. S2CID 205418589. Nagalakshmi U, Wang Z, Waern K, Shou

    RNA-Seq

    RNA-Seq

    RNA-Seq

  • Mutation
  • Alteration in the nucleotide sequence of a genome

    Nature Methods. 6 (10): 767–72. Bibcode:2009NaMet...6..767V. doi:10.1038/nmeth.1377. PMC 2957483. PMID 19767758. Allen HL, Estrada K, Lettre G, Berndt

    Mutation

    Mutation

    Mutation

  • Single-cell sequencing
  • Examines sequence information from individual cells

    doi:10.1038/nmeth.2771. PMID 24524131. S2CID 5252333. "Method of the year 2013". Nature Methods. 11 (1): 1. January 2014. doi:10.1038/nmeth.2801. PMID 24524124

    Single-cell sequencing

    Single-cell_sequencing

  • Genetically modified organism
  • Organism altered by genetic engineering

    transgenesis in the domestic cat". Nature Methods. 8 (10): 853–9. doi:10.1038/nmeth.1703. PMC 4006694. PMID 21909101. Staff (3 April 2012). "Biology of HIV"

    Genetically modified organism

    Genetically modified organism

    Genetically_modified_organism

  • DNA sequencing
  • Process of determining the nucleic acid sequence

    sequencing of 5-hydroxymethylcytosine". Nature Methods. 9 (1): 75–7. doi:10.1038/nmeth.1779. PMC 3646335. PMID 22101853. Czernecki, Dariusz; Bonhomme, Frédéric;

    DNA sequencing

    DNA sequencing

    DNA_sequencing

  • Laboratory mouse
  • Mouse used for scientific research

    anxiety in laboratory mice". Nature Methods. 7 (10): 825–826. doi:10.1038/nmeth.1500. PMID 20835246. Gouveia K, Hurst JL (March 2017). "Optimising reliability

    Laboratory mouse

    Laboratory mouse

    Laboratory_mouse

  • Unique molecular identifier
  • using unique molecular identifiers". Nat. Methods. 9 (1): 72–4. doi:10.1038/nmeth.1778. PMID 22101854. S2CID 39225091. Islam S, Zeisel A, Joost S, La Manno

    Unique molecular identifier

    Unique_molecular_identifier

  • Gene
  • Sequence of DNA that determines traits in an organism

    mammalian transcriptomes by RNA-Seq". Nature Methods. 5 (7): 621–8. doi:10.1038/nmeth.1226. PMC 13303166. PMID 18516045. Pennacchio LA, Bickmore W, Dean A, Nobrega

    Gene

    Gene

    Gene

  • Photoactivated localization microscopy
  • Fluorescence microscopy imaging method

    "Method of the Year 2008". Nature Methods. 6 (1): 1–109. 2009. doi:10.1038/nmeth.f.244. Ha, Taekjip & Tinnefeld, Philip (2012). "Photophysics of Fluorescent

    Photoactivated localization microscopy

    Photoactivated_localization_microscopy

  • Enzyme Commission number
  • Chemical numbering scheme

    compare enzyme reactions". Nature Methods. 11 (2): 171–174. doi:10.1038/nmeth.2803. PMC 4122987. PMID 24412978. Hoffman-Ostenhof, O (1953). "Suggestions

    Enzyme Commission number

    Enzyme_Commission_number

  • Multiomics
  • Biological analysis approach

    epigenetic heterogeneity". Nature Methods. 11 (8): 817–820. doi:10.1038/nmeth.3035. ISSN 1548-7105. PMC 4117646. PMID 25042786. Angermueller, Christof;

    Multiomics

    Multiomics

    Multiomics

  • Synthetic biology
  • Interdisciplinary branch of biology and engineering

    Nature Methods. 11 (5): 499–507. Bibcode:2014NatCB..11..499K. doi:10.1038/nmeth.2918. PMC 7098426. PMID 24781323. Blight KJ, Kolykhalov AA, Rice CM (December

    Synthetic biology

    Synthetic biology

    Synthetic_biology

  • Quantum dot
  • Nano-scale semiconductor particles

    receptors on living cells". Nature Methods. 5 (5): 397–399. doi:10.1038/nmeth.1206. PMC 2637151. PMID 18425138. Akerman, M. E.; Chan, W. C. W.; Laakkonen

    Quantum dot

    Quantum dot

    Quantum_dot

  • Gibson assembly
  • Patented molecular cloning method

    several hundred kilobases". Nature Methods. 6 (5): 343–345. doi:10.1038/nmeth.1318. PMID 19363495. S2CID 1351008. A Guide to Gibson Assembly from the

    Gibson assembly

    Gibson assembly

    Gibson_assembly

  • Ruedi Aebersold
  • Swiss biologist (born 1954)

    assays for proteins and proteomes". Nature Methods. 7 (1): 43–6. doi:10.1038/nmeth.1408. PMID 19966807. S2CID 193432. Picotti P, Bodenmiller B, Aebersold R

    Ruedi Aebersold

    Ruedi Aebersold

    Ruedi_Aebersold

  • Polymerase chain reaction
  • Laboratory technique to multiply a DNA sample for study

    sequence-verified DNA molecules". Nature Methods. 9 (9): 913–15. doi:10.1038/nmeth.2137. PMC 3433648. PMID 22886093. Vincent M, Xu Y, Kong H (August 2004)

    Polymerase chain reaction

    Polymerase chain reaction

    Polymerase_chain_reaction

  • Axon terminal
  • Nerve fiber part

    glutamate neurotransmission". Nature Methods. 10 (2): 162–170. doi:10.1038/nmeth.2333. PMC 4469972. PMID 23314171. Dürst CD, Wiegert JS, Schulze C, Helassa

    Axon terminal

    Axon terminal

    Axon_terminal

  • Zebrafish
  • Species of fish

    Methods. 11 (9). Nature Publishing Group US New York: 883–884. doi:10.1038/nmeth.3040. PMID 25068735. Cho SJ, Park E, Baker A, Reid AY (2020-09-10). "Age

    Zebrafish

    Zebrafish

    Zebrafish

  • Fiji (software)
  • Open-source image-processing software

    biological-image analysis". Nature Methods. 9 (7): 676–682. doi:10.1038/nmeth.2019. PMC 3855844. PMID 22743772. Fiji was presented publicly for the first

    Fiji (software)

    Fiji (software)

    Fiji_(software)

  • Hi-C (genomic analysis technique)
  • Genomic analysis technique

    landscape of human lincRNA genes". Nature Methods. 12 (1): 71–78. doi:10.1038/nmeth.3205. ISSN 1548-7105. PMC 4281301. PMID 25437436. Mifsud, Borbala; Tavares-Cadete

    Hi-C (genomic analysis technique)

    Hi-C (genomic analysis technique)

    Hi-C_(genomic_analysis_technique)

  • List of sequence alignment software
  • protein alignment using DIAMOND". Nature Methods. 12 (1): 59–60. doi:10.1038/nmeth.3176. PMID 25402007. S2CID 5346781. B Buchfink, K Reuter and HG Drost (2021)

    List of sequence alignment software

    List_of_sequence_alignment_software

  • Edward Boyden
  • American neuroscientist (born 1979)

    Nature Methods. 11 (3): 338–346. Bibcode:2014NatCB..11..338K. doi:10.1038/nmeth.2836. ISSN 1548-7105. PMC 3943671. PMID 24509633. Sahel, José-Alain; Boulanger-Scemama

    Edward Boyden

    Edward Boyden

    Edward_Boyden

  • Nanoparticle
  • Particle with size less than 100 nm

    imaging receptors on living cells". Nature Methods. 5 (5): 397–9. doi:10.1038/nmeth.1206. PMC 2637151. PMID 18425138. Campbell CT (20 August 2013). "The Energetics

    Nanoparticle

    Nanoparticle

    Nanoparticle

  • Chromatin
  • Complex of DNA and protein in eukaryotic cells

    and nucleosome position". Nature Methods. 10 (12): 1213–1218. doi:10.1038/nmeth.2688. ISSN 1548-7105. PMC 3959825. PMID 24097267. Mieczkowski J, Cook A

    Chromatin

    Chromatin

  • Green fluorescent protein
  • Protein that exhibits bright green fluorescence when exposed to ultraviolet light

    cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–9. doi:10.1038/nmeth.3935. PMC 5007177. PMID 27479328. Mattson S, Tran GN, Rodriguez EA (2023)

    Green fluorescent protein

    Green fluorescent protein

    Green_fluorescent_protein

  • Cell cycle
  • Events leading to cell division

    cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–769. doi:10.1038/nmeth.3935. PMC 5007177. PMID 27479328. Salmenov R, Mummery C, ter Huurne M (October

    Cell cycle

    Cell cycle

    Cell_cycle

  • List of animals by number of neurons
  • using light-sheet microscopy". Nature Methods. 10 (5): 413–20. doi:10.1038/nmeth.2434. PMID 23524393. S2CID 3353074. editorial. "The FlyWire connectome:

    List of animals by number of neurons

    List of animals by number of neurons

    List_of_animals_by_number_of_neurons

  • Proteomics
  • Large-scale study of proteins

    functional proteomics data". Nature Methods. 10 (11): 1046–1047. doi:10.1038/nmeth.2650. PMC 4076789. PMID 24037243. Anderson NL (February 2010). "The clinical

    Proteomics

    Proteomics

    Proteomics

  • Simple linear regression
  • Linear regression model with a single explanatory variable

    "Simple linear regression". Nature Methods. 12 (11): 999–1000. doi:10.1038/nmeth.3627. ISSN 1548-7091. OCLC 5912005539. PMID 26824102. S2CID 261269711. Kenney

    Simple linear regression

    Simple linear regression

    Simple_linear_regression

  • Statistical significance
  • Concept in inferential statistics

    P values and t-tests". Nature Methods. 10 (11): 1041–1042. doi:10.1038/nmeth.2698. PMID 24344377. Sham, Pak C.; Purcell, Shaun M (17 April 2014). "Statistical

    Statistical significance

    Statistical_significance

  • Induced pluripotent stem cell
  • Pluripotent stem cell generated directly from a somatic cell

    improved induction of human iPSCs". Nature Methods. 6 (11): 805–8. doi:10.1038/nmeth.1393. PMC 3724527. PMID 19838168. Zhou H, Wu S, Joo JY, Zhu S, Han DW, Lin

    Induced pluripotent stem cell

    Induced pluripotent stem cell

    Induced_pluripotent_stem_cell

  • Chromosome conformation capture
  • Method in molecular biology

    vastly improved sensitivity". Nature Methods. 13 (1): 74–80. doi:10.1038/nmeth.3664. PMC 4724891. PMID 26595209. Sahlén P, Abdullayev I, Ramsköld D, Matskova

    Chromosome conformation capture

    Chromosome conformation capture

    Chromosome_conformation_capture

  • Enzyme catalysis
  • Catalysis of chemical reactions by enzymes

    compare enzyme reactions". Nature Methods. 11 (2): 171–174. doi:10.1038/nmeth.2803. PMC 4122987. PMID 24412978. Fersht A (1998). Structure and Mechanism

    Enzyme catalysis

    Enzyme catalysis

    Enzyme_catalysis

  • Nucleoid
  • Region within a prokaryotic cell containing genetic material

    "Focused ion beams in biology". Nature Methods. 12 (11): 1021–31. doi:10.1038/nmeth.3623. PMC 6993138. PMID 26513553. Mercier R, Petit MA, Schbath S, Robin

    Nucleoid

    Nucleoid

    Nucleoid

  • Model organism
  • Organisms used to study biology across species

    skills of cell lines and mice". Nature Methods. 11 (6): 617–620. doi:10.1038/nmeth.2966. PMID 24874573. Goldstein, Bob; King, Nicole (November 2016). "The

    Model organism

    Model organism

    Model_organism

  • Gastrulation
  • Embryologic stage in which germ layers form

    human embryonic stem cells". Nature Methods. 11 (8): 847–854. doi:10.1038/nmeth.3016. PMC 4341966. PMID 24973948. Etoc, Fred; Metzger, Jakob; Ruzo, Albert;

    Gastrulation

    Gastrulation

    Gastrulation

  • Tomography
  • Imaging by sections or sectioning using a penetrative wave

    spectro-microtomography". Nature Methods. 10 (9): 861–864. doi:10.1038/nmeth.2596. PMID 23913258. S2CID 9900276. Cramer, A., Hecla, J., Wu, D. et al

    Tomography

    Tomography

    Tomography

  • Cryo-electron microscopy
  • Electron microscopy technique

    2017). "Cryo-electron tomography". Nature Methods. 14 (1): 34. doi:10.1038/nmeth.4115. ISSN 1548-7091. S2CID 27162203. Dubochet J, Knapek E (April 2018)

    Cryo-electron microscopy

    Cryo-electron microscopy

    Cryo-electron_microscopy

  • Phototoxicity
  • Chemically-induced skin irritation following exposure to light

    live fluorescence imaging". Nature Methods. 14 (7): 657–661. doi:10.1038/nmeth.4344. hdl:21.11116/0000-0002-8B80-0. ISSN 1548-7105. PMID 28661494. S2CID 6844352

    Phototoxicity

    Phototoxicity

    Phototoxicity

  • Cas9
  • Microbial protein found in Streptococcus pyogenes M1 GAS

    for engineering biology". Nature Methods. 10 (10): 957–963. doi:10.1038/nmeth.2649. PMC 4051438. PMID 24076990. Gostimskaya I (August 2022). "CRISPR-Cas9:

    Cas9

    Cas9

    Cas9

  • MCherry
  • Monomeric red fluorescent protein

    two-color fluorescence microscopy". Nature Methods. 6 (2): 153–159. doi:10.1038/nmeth.1298. ISSN 1548-7091. PMC 2901231. PMID 19169259. Shaner, Nathan C; Campbell

    MCherry

    MCherry

  • Transcriptomics technologies
  • Study of RNA transcripts

    transcriptomics in biology and medicine". Nature Methods. 11 (1): 22–4. doi:10.1038/nmeth.2764. PMID 24524133. S2CID 27632439. Kolodziejczyk AA, Kim JK, Svensson

    Transcriptomics technologies

    Transcriptomics_technologies

  • Amplicon sequence variant
  • Single DNA sequences obtained from a high-throughput analysis of marker genes

    581–583. Bibcode:2016NatCB..13..581C. bioRxiv 10.1101/024034. doi:10.1038/nmeth.3869. PMC 4927377. PMID 27214047. Amir A, McDonald D, Navas-Molina JA, Kopylova

    Amplicon sequence variant

    Amplicon sequence variant

    Amplicon_sequence_variant

  • Molecular pathology
  • preserved tissue and cells". Nature Methods. 10 (9): 857–860. doi:10.1038/nmeth.2563. ISSN 1548-7091. PMID 23852452. Ogino, Shuji; Stampfer, Meir (17 March

    Molecular pathology

    Molecular_pathology

  • List of biological databases
  • electron microscopy image data". Nature Methods. 13 (5): 387–388. doi:10.1038/nmeth.3806. PMID 27067018. S2CID 38996040. Starruß J, de Back W, Brusch L, Deutsch

    List of biological databases

    List_of_biological_databases

  • Protein–protein interaction
  • Physical interactions and constructions between multiple proteins

    binary interactome mapping". Nature Methods. 6 (1): 83–90. doi:10.1038/nmeth.1280. PMC 2872561. PMID 19060904. Battesti A, Bouveret E (December 2012)

    Protein–protein interaction

    Protein–protein interaction

    Protein–protein_interaction

  • CRISPR activation
  • Type of CRISPR tool

    CRISPR-Cas9-based transcription factors". Nature Methods. 10 (10): 973–6. doi:10.1038/nmeth.2600. PMC 3911785. PMID 23892895. Maeder ML, Linder SJ, Cascio VM, Fu Y

    CRISPR activation

    CRISPR activation

    CRISPR_activation

  • David Klenerman
  • British biophysical chemist

    Illumina sequencing system". Nature Methods. 5 (12): 1005–1010. doi:10.1038/nmeth.1270. PMC 2610436. PMID 19034268. Cronn, Richard (27 August 2008). "Multiplex

    David Klenerman

    David Klenerman

    David_Klenerman

  • SDS-PAGE
  • Analytical technique

    visualizing hydrolytic enzymes". Nature Methods. 10 (3): 211–220. doi:10.1038/nmeth.2371. PMID 23443633. S2CID 5314901. Janson, Jan-Christer (3 January 2012)

    SDS-PAGE

    SDS-PAGE

    SDS-PAGE

  • Biogeochemical cycle
  • Chemical transfer pathway between Earth's biological and non-biological parts

    coverage and composition". Nature Methods. 11 (11): 1144–1146. doi:10.1038/nmeth.3103. PMID 25218180. S2CID 24696869. Anantharaman, Karthik; Brown, Christopher

    Biogeochemical cycle

    Biogeochemical cycle

    Biogeochemical_cycle

  • Recombinant DNA
  • DNA molecules formed by human agency at a molecular level generating novel DNA sequences

    several hundred kilobases". Nature Methods. 6 (5): 343–345. doi:10.1038/nmeth.1318. ISSN 1548-7105. PMID 19363495. Hong, Woojin; Ha, Seokjun G.; Kwon

    Recombinant DNA

    Recombinant DNA

    Recombinant_DNA

  • Proteoform
  • Different forms of a protein

    describing protein complexity". Nature Methods. 10 (3): 186–7. doi:10.1038/nmeth.2369. PMC 4114032. PMID 23443629. Lima DB, Dupré M, Duchateau M, Gianetto

    Proteoform

    Proteoform

  • Dimethyl sulfate
  • Chemical compound

    structure probing in vivo". Nature Methods. 14 (1): 75–82. doi:10.1038/nmeth.4057. PMC 5508988. PMID 27819661. Streitwieser, A.; Heathcock, C. H.; Kosower

    Dimethyl sulfate

    Dimethyl sulfate

    Dimethyl_sulfate

  • Wnt signaling pathway
  • Group of signal transduction pathways involved in embryonic development

    generation of human cardiomyocytes". Nature Methods. 11 (8): 855–60. doi:10.1038/nmeth.2999. PMC 4169698. PMID 24930130. Kaldis P, Pagano M (December 2009). "Wnt

    Wnt signaling pathway

    Wnt_signaling_pathway

  • ATAC-seq
  • Molecular biology technique

    Nature Methods. 10 (12): 1213–8. Bibcode:2013NatCB..10.1213B. doi:10.1038/nmeth.2688. PMC 3959825. PMID 24097267. Buenrostro JD, Wu B, Chang HY, Greenleaf

    ATAC-seq

    ATAC-seq

    ATAC-seq

  • ImageJ
  • Java-based image processing program

    ImageJ: 25 years of image analysis". Nat Methods. 9 (7): 671–675. doi:10.1038/nmeth.2089. PMC 5554542. PMID 22930834. Collins TJ (July 2007). "ImageJ for microscopy"

    ImageJ

    ImageJ

    ImageJ

  • Brainbow
  • Neuroimaging technique to differentiate neurons

    for the Brainbow toolbox". Nature Methods. 10 (6): 540–547. doi:10.1038/nmeth.2450. PMC 3713494. PMID 23817127. Stefanie Hampel; Phuong Chung; Claire

    Brainbow

    Brainbow

    Brainbow

  • List of electronic laboratory notebook software packages
  • "Coding your way out of a problem". Nature Methods. 8 (7): 541–3. doi:10.1038/nmeth.1631. PMID 21716280. S2CID 13175560. Higgins, Stuart G.; Nogiwa-Valdez,

    List of electronic laboratory notebook software packages

    List_of_electronic_laboratory_notebook_software_packages

  • CellCognition
  • Software for microscopy

    high-throughput live cell imaging" (PDF). Nature Methods. 7 (9): 747–54. doi:10.1038/nmeth.1486. hdl:1912/3869. PMID 20693996. S2CID 205419414. Schmitz MH, Held M

    CellCognition

    CellCognition

  • Sergiu P. Pașca
  • Romanian-American scientist

    Year 2017: Organoids". Nature Methods. 15: 1. 3 January 2018. doi:10.1038/nmeth.4575. Paşca, Anca M.; Sloan, Steven A.; Clarke, Laura E.; et al. (2015)

    Sergiu P. Pașca

    Sergiu P. Pașca

    Sergiu_P._Pașca

  • List of single cell omics methods
  • analysis of a single cell". Nature Methods. 6 (5): 377–82. doi:10.1038/nmeth.1315. PMID 19349980. S2CID 16570747. "Fluidigm | Single-Cell Advances".

    List of single cell omics methods

    List_of_single_cell_omics_methods

  • Hidden Markov model
  • Statistical Markov model

    Nature Methods. 9 (3): 215–216. Bibcode:2012NaMet...9..215E. doi:10.1038/nmeth.1906. PMC 3577932. PMID 22373907. Lawrence R. Rabiner (February 1989). "A

    Hidden Markov model

    Hidden_Markov_model

  • Proximity labeling
  • Laboratory technique

    microscopy and proximity labeling". Nature Methods. 12 (1): 51–54. doi:10.1038/nmeth.3179. hdl:1721.1/110613. ISSN 1548-7105. PMC 4296904. PMID 25419960. Kalocsay

    Proximity labeling

    Proximity labeling

    Proximity_labeling

  • ABI Solid Sequencing
  • massive-scale mRNA sequencing". Nature Methods. 5 (7): 613–9. doi:10.1038/nmeth.1223. PMID 18516046. S2CID 19790151. Tang F, Barbacioru C, Wang Y, et al

    ABI Solid Sequencing

    ABI Solid Sequencing

    ABI_Solid_Sequencing

  • Christopher Voigt
  • American bioengineer

    of genetic circuit design". Nature Methods. 11 (5): 508–20. doi:10.1038/nmeth.2926. PMC 4230274. PMID 24781324. Yang L, Nielsen AA, Fernandez-Rodriguez

    Christopher Voigt

    Christopher Voigt

    Christopher_Voigt

  • 25-NB
  • Family of serotonergic psychedelics

    5-dimethoxy-4-iodophenyl)-2-aminoethane 919797-18-5 2,5-dimethoxy-4-iodo H phenyl 25I-NMeTh N-[(thiophen-2-yl)methyl]-1-(2,5-dimethoxy-4-iodophenyl)-2-aminoethane 1391499-03-8

    25-NB

    25-NB

    25-NB

  • Biliverdin
  • Green bile pigment

    cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–9. doi:10.1038/nmeth.3935. ISSN 1548-7105. PMC 5007177. PMID 27479328. Tsien, Roger Y. (1998-01-01)

    Biliverdin

    Biliverdin

    Biliverdin

  • Sulforhodamine 101
  • Red fluorescent dye

    with sulforhodamine 101". Nature Methods. 11 (11): 1081–1082. doi:10.1038/nmeth.3140. PMC 4539948. PMID 25357236. Kang, J.; Kang N.; Yu, Y.; Zhang, J.;

    Sulforhodamine 101

    Sulforhodamine 101

    Sulforhodamine_101

  • Isoform
  • Different products from the same gene

    describing protein complexity". Nature Methods. 10 (3): 186–7. doi:10.1038/nmeth.2369. PMC 4114032. PMID 23443629. Mitchell PJ, Tjian R (July 1989). "Transcriptional

    Isoform

    Isoform

    Isoform

  • Metagenomics
  • Study of genes found in the environment

    microbial marker-gene surveys". Nature Methods. 10 (12): 1200–2. doi:10.1038/nmeth.2658. PMC 4010126. PMID 24076764. Committee on Metagenomics: Challenges

    Metagenomics

    Metagenomics

    Metagenomics

  • DNA barcoding
  • Method of species identification using a short section of DNA

    Nature Methods. 10 (10): 996–998. Bibcode:2013NaMet..10..996E. doi:10.1038/nmeth.2604. ISSN 1548-7091. PMID 23955772. S2CID 7181682. Caporaso, J Gregory;

    DNA barcoding

    DNA barcoding

    DNA_barcoding

  • Lancelet
  • Subphylum of chordates

    Nature Methods. 10 (5) (published 24 March 2013): 407–409. doi:10.1038/nmeth.2413. ISSN 1548-7105. PMC 3811051. PMID 23524392. Kotpal, R.L. (2008–2009)

    Lancelet

    Lancelet

    Lancelet

  • Third-generation sequencing
  • DNA sequencing

    407–410. Bibcode:2017NatCB..14..407S. bioRxiv 10.1101/047142. doi:10.1038/nmeth.4184. Schadt, E. E.; Turner, S.; Kasarskis, A. (2010-10-15). "A window into

    Third-generation sequencing

    Third-generation_sequencing

  • Genome editing
  • Type of genetic engineering

    of the Year 2011". Nature Methods. 9 (1): 1. January 2012. doi:10.1038/nmeth.1852. PMID 22312634. Esvelt KM, Wang HH (2013). "Genome-scale engineering

    Genome editing

    Genome editing

    Genome_editing

  • Sarah Teichmann
  • German bioinformatician

    Author File: Janet Thornton". Nature Methods. 11 (2): 115. doi:10.1038/nmeth.2831. PMID 24645189. S2CID 1970327. Pain, Elisabeth (2015). "Harnessing

    Sarah Teichmann

    Sarah Teichmann

    Sarah_Teichmann

  • Protospacer adjacent motif
  • Type of base-pair DNA sequence

    for engineering biology". Nature Methods. 10 (10): 957–963. doi:10.1038/nmeth.2649. PMC 4051438. PMID 24076990. Mali P, Yang L, Esvelt KM, Aach J, Guell

    Protospacer adjacent motif

    Protospacer_adjacent_motif

  • Roger Y. Tsien
  • American biochemist and Nobel laureate (1952–2016)

    cyanobacterial phycobiliprotein". Nature Methods. 13 (9): 763–9. doi:10.1038/nmeth.3935. ISSN 1548-7105. PMC 5007177. PMID 27479328. Tsien, Roger Y. (January

    Roger Y. Tsien

    Roger Y. Tsien

    Roger_Y._Tsien

  • List of mass spectrometry software
  • Nature Methods. 14 (5): 513–520. Bibcode:2017NatCB..14..513K. doi:10.1038/nmeth.4256. PMC 5409104. PMID 28394336. Sabareesh, Varatharajan; Singh, Gurpreet

    List of mass spectrometry software

    List_of_mass_spectrometry_software

  • Spatial transcriptomics
  • Range of methods designed for assigning cell types

    single cells in live tissue". Nature Methods. 11 (2): 190–6. doi:10.1038/nmeth.2804. PMC 3964595. PMID 24412976. Junker JP, Noël ES, Guryev V, Peterson

    Spatial transcriptomics

    Spatial transcriptomics

    Spatial_transcriptomics

  • Lys-N
  • Lys-N metalloendopeptidase". Nature Methods. 5 (5): 405–7. doi:10.1038/nmeth.1204. PMID 18425140. S2CID 28504546. The MEROPS online database for peptidases

    Lys-N

    Lys-N

    Lys-N

  • FASTQ format
  • File format for sequences and quality scores

    13 (12). Springer Science and Business Media LLC: 1005–1008. doi:10.1038/nmeth.4037. ISSN 1548-7091. PMID 27776113. S2CID 205425373. Ochoa, Idoia; Asnani

    FASTQ format

    FASTQ_format

  • Bioconductor
  • Software project for the analysis of genomic data

    genomic analysis with Bioconductor". Nat Methods. 12 (2): 115–21. doi:10.1038/nmeth.3252. PMC 4509590. PMID 25633503. Liao Y, Smyth GK, Shi W (May 2019). "The

    Bioconductor

    Bioconductor

  • Fiber photometry
  • Calcium imaging technique

    across the mammalian brain". Nature Methods. 13 (4): 325–328. doi:10.1038/nmeth.3770. ISSN 1548-7105. PMC 5717315. PMID 26878381. Wang, Yuanmo; DeMarco

    Fiber photometry

    Fiber_photometry

  • Hadamard transform
  • Involutive change of basis in linear algebra

    the Hadamard transform". Nature Methods. 11 (11): 1131–1134. doi:10.1038/nmeth.3139. PMC 4216935. PMID 25282611. Compare Figure 1 in Townsend, W.J.; Thornton

    Hadamard transform

    Hadamard transform

    Hadamard_transform

  • Núria López Bigas
  • Researcher on computational cancer genomics

    drivers across tumor types". Nature Methods. 10 (11): 1081–1082. doi:10.1038/nmeth.2642. ISSN 1548-7091. PMC 5758042. PMID 24037244. "BBGLab – Barcelona Biomedical

    Núria López Bigas

    Núria López Bigas

    Núria_López_Bigas

  • Geobacillus stearothermophilus
  • Species of bacterium

    structure probing in vivo". Nature Methods. 14 (1): 75–82. doi:10.1038/nmeth.4057. ISSN 1548-7091. PMC 5508988. PMID 27819661. Type strain of Geobacillus

    Geobacillus stearothermophilus

    Geobacillus stearothermophilus

    Geobacillus_stearothermophilus

  • DNA sequencer
  • Scientific instrument that automates the DNA sequencing process

    Nat Methods. 5 (12): 1005–1010. Bibcode:2008NatCB...5.1005Q. doi:10.1038/nmeth.1270. PMC 2610436. PMID 19034268. Li, Heng; Ruan, Jue; Durbin, Richard (2008-11-01)

    DNA sequencer

    DNA sequencer

    DNA_sequencer

  • Haplotype estimation
  • for thousands of genomes". Nature Methods. 9 (2): 179–181. doi:10.1038/nmeth.1785. PMID 22138821. S2CID 13765612. Williams, A. L.; Patterson, N.; Glessner

    Haplotype estimation

    Haplotype_estimation

  • Förster resonance energy transfer
  • Photochemical energy transfer mechanism

    ligand binding to GPCRs". Nature Methods. 12 (7): 661–663. doi:10.1038/nmeth.3398. PMC 4488387. PMID 26030448. Machleidt T, Woodroofe CC, Schwinn MK

    Förster resonance energy transfer

    Förster resonance energy transfer

    Förster_resonance_energy_transfer

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