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Genus of archaea
Thermococcus is a genus of thermophilic Archaea in the family the Thermococcaceae. Members of the genus Thermococcus are typically irregularly shaped coccoid
Thermococcus
Species of archaeon
80 °C (176 °F). Thermococcus and Pyrococcus (literally "ball of fire") are both chemoorganotrophic and obligately anaerobic. Thermococcus spp. prefer 70–95 °C
Thermococcus_gammatolerans
Species of archaeon
environments. Springer, 1999. "Thermococcus peptonophilus". The Encyclopedia of Life. LPSN WORMS Type strain of Thermococcus peptonophilus at BacDive - the
Thermococcus_peptonophilus
Class of archaea
around 75 to 85 °C. Thermococcus and Pyrococcus (literally "balls of fire") are both obligately anaerobic chemoorganotrophs. Thermococcus prefers 70–95 °C
Thermococci
Extremophile species of bacterium
Rubrobacter (phylum Actinomycetota); among the archaea, the species Thermococcus gammatolerans shows comparable radioresistance. The genus name Deinococcus
Deinococcus_radiodurans
Species of archaeon
Thermococcus hydrothermalis is a hyperthermophilic archaeon. It is strictly anaerobic and coccus-shaped, and its cells range from 0.8 to 2.0 μm in diameter
Thermococcus_hydrothermalis
Species of archaeon
analysis, the chitonophagus was identified to be of the "Thermococcus" genus (see Thermococcus to Pyrococcus chitonophagus). Its thermophilic quality indicates
Pyrococcus_chitonophagus
Species of archaeon
PMID 15064976. S2CID 23460507. "Thermococcus profundus". The Encyclopedia of Life. LPSN Type strain of Thermococcus profundus at BacDive - the Bacterial
Thermococcus_profundus
Species of archaeon
1017/cbo9780511614767. ISBN 978-0-521-59725-8. "Thermococcus alcaliphilus". The Encyclopedia of Life. LPSN WORMS Type strain of Thermococcus alcaliphilus at BacDive - the
Thermococcus_alcaliphilus
Species of archaeon
Thermococcus celer is a Gram-negative, spherical-shaped archaeon of the genus Thermococcus. The discovery of T. celer played an important role in rerooting
Thermococcus_celer
Species of archaeon
of Thermococcus stetteri cell envelope". Current Microbiology. 27 (1): 5–9. doi:10.1007/BF01576826. ISSN 0343-8651. S2CID 24797998. "Thermococcus stetteri"
Thermococcus_stetteri
Species of archaeon
Thermococcus litoralis (T. litoralis) is a species of Archaea that is found around deep-sea hydrothermal vents as well as shallow submarine thermal springs
Thermococcus_litoralis
Species of archaeon
Thermococcus kodakarensis is a species of thermophilic archaea. The type strain T. kodakarensis KOD1 is one of the best-studied members of the genus. T
Thermococcus_kodakarensis
Species of archaeon
Jebbar, Mohamed (November 2015). "Genome expression of Thermococcus barophilus and Thermococcus kodakarensis in response to different hydrostatic pressure
Thermococcus_barophilus
DNA polymerases that originate from thermophiles
include: Pyrococcus: P. furiosus = Pfu, P. woesei = Pwo, P. abyssi = Pab. Thermococcus: Vent/Tli from Tc. litoralis, KOD/Pfx from Tc. kodakarensis, Tc. aggregans
Thermostable_DNA_polymerase
Organisms capable of living in extreme environments
deep under Earth's surface are thermophilic and piezophilic such as Thermococcus barophilus. A polyextremophile living at the summit of a mountain in
Extremophile
Domain of organisms
These organisms can be prominent in biofilms. Notably, aggregates of Thermococcus coalescens cells fuse together in culture, forming single giant cells
Archaea
Chemical element with atomic number 74 (W)
ferredoxin oxidoreductase (AOR) in Thermococcus strain ES-1 Formaldehyde ferredoxin oxidoreductase (FOR) in Thermococcus litoralis Glyceraldehyde-3-phosphate
Tungsten
Species of archaeon
extremophile's doubling time and rapid swimming. Thermostable DNA polymerase Thermococcus kodakarensis Fiala, Gerhard; Stetter, Karl O (1986). "Pyrococcus furiosus
Pyrococcus_furiosus
Chemical compound
prototrophy selection marker in Microbiology for the study of Sulfolobus and Thermococcus genus. Agmatine produces mild reductions in heart rate and blood pressure
Agmatine
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanococcus
the polymerase chain reaction. It was isolated from the thermophile Thermococcus litoralis. Vigneault F, Drouin R (2005). "Optimal conditions and specific
Vent_DNA_polymerase
hyperthermophilic, piezophilic, heterotrophic, and carboxydotrophic archaeon Thermococcus barophilus MP". Journal of Bacteriology. 193 (6): 1481–2. doi:10.1128/JB
List of sequenced archaeal genomes
List_of_sequenced_archaeal_genomes
Pathogenic type of misfolded protein
"Proteolysis of abnormal prion protein with a thermostable protease from Thermococcus kodakarensis KOD1". Applied Microbiology and Biotechnology. 98 (5): 2113–20
Prion
Class of enzymes which synthesize nucleic acid chains or polymers
scientists successfully used directed evolution to modify the proofreading Thermococcus kodakarensis DNA-directed DNA polymerase into what they call a reverse
Polymerase
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Thermococcaceae
Professor of Microbiology
Thomas J Santangelo An archaeal histone is required for transformation of Thermococcus kodakarensis. Thomas J Santangelo; L'ubomíra Cuboňová; John N Reeve Deletion
John_N._Reeve
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanomicrobium
1988 Palaeococcus Takai et al. 2000 Pyrococcus Fiala & Stetter 1986 Thermococcus Zillig 1983 ["Caldococcus" Svetlichny et al. 1987] Family Methanothermaceae
List_of_Archaea_genera
Level of ionizing radiation that organisms are able to withstand
800 Insects Milnesium tardigradum 5,000 Eutardigrade Deinococcus radiodurans 15,000 Bacteria Thermococcus gammatolerans 30,000 Archaea
Radioresistance
Class of enzyme
adenosine monophosphate (AMP). A similar enzyme has also been found in Thermococcus kodakarensis, where it acts on glucosamine as well as glucose. In humans
ADP-specific_glucokinase
Group of proteins having inorganic pyrophosphatase activity
Thermostable soluble pyrophosphatase had been isolated from the extremophile Thermococcus litoralis. The 3-dimensional structure was determined using x-ray crystallography
Inorganic_pyrophosphatase
Anaerobic, hyperthermophilic archaeon
to GIs and similar structures in other extremophilic archea such as Thermococcus barophilus and Pyrococcus abyssi. In this GI, a potential toxin-antitoxin
Pyrococcus_yayanosii
Class of enzymes
(UDP) or adenosine diphosphate. The enzyme first characterised from Thermococcus litoralis requires magnesium ion, Mg2+ for maximal activity. It has also
Alpha,alpha-trehalose synthase
Alpha,alpha-trehalose_synthase
Bpu95I, Bsh1236I, Bsp50I, BstFNI, BstUI, Csp68KVI, FalII, FnuDII TliI Thermococcus litoralis 5' CTCGAG 3' GAGCTC 5' ---C TCGAG--- 3' 3' ---GAGCT C---
List of restriction enzyme cutting sites: T–Z
List_of_restriction_enzyme_cutting_sites:_T–Z
American marine microbiologist
(2001-06-01). "Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean". FEMS Microbiology
John_Baross
Chemical compound
archaea (bacteria tend to stick to the standard molecule): Pyrococcus and Thermococcus have a poly-β3(l→4)-linked N-acetylglucosamine side chain instead of
Tetrahydromethanopterin
Protein family
archaea, Pyrococcus furiosus. The archaeons Pyrococcus ES-4 strain and Thermococcus ES-1 strain differ by their substrate specificity: AFOs show a broader
Aldehyde ferredoxin oxidoreductase
Aldehyde_ferredoxin_oxidoreductase
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanococcales
Genus of archaea
hybrids derived from the family-B enzymes of Pyrococcus furiosus and Thermococcus kodakarensis: improving performance in the polymerase chain reaction"
Pyrococcus
Genus of archaea
1016/S0960-9822(09)00455-2. PMID 8793300. Arab H, Volker H, Thomm M (2000). "Thermococcus aegaeicus sp. nov. and Staphylothermus hellenicus sp. nov., two novel
Staphylothermus
Methods to reduce failure and increase the reliability of PCR
DNA polymerase, a recombinant form of Thermococcus kodakaraensis KOD1; Vent, which is extracted from Thermococcus litoralis; Pfu DNA polymerase, which
Polymerase chain reaction optimization
Polymerase_chain_reaction_optimization
Synthetic nucleic acid analogues
bio-synthesis: HNA polymerases(like TgoT_6G12, which is archaeal polymerase from Thermococcus gorgonarius) have been engineered to synthesize HNA polymers. Cyclohexene
Xeno_nucleic_acid
Class of enzymes
(April 2014). "A highly divergent archaeo-eukaryotic primase from the Thermococcus nautilus plasmid, pTN2". Nucleic Acids Research. 42 (6): 3707–19. doi:10
Primase
Reeve, JN (March 2008). "Polarity in archaeal operon transcription in Thermococcus kodakaraensis". Journal of Bacteriology. 190 (6): 2244–8. doi:10.1128/JB
Archaeal_transcription
Comparison of a wide range of radiation dosages
Stéphane; Corre, Erwan; Forterre, Patrick; Prieur, DanielYR 2003 (2003). "Thermococcus gammatolerans sp. nov., a hyperthermophilic archaeon from a deep-sea
Orders of magnitude (radiation)
Orders_of_magnitude_(radiation)
first discovered in the archaea Methanococcus jannaschii and thermophile Thermococcus kodakarensis and since then has been used in a variety of applications
BpsA
Protein family
maturation factor; HydD is used to designate hydrogenase structural genes in Thermococcus litoralis, Pyrococcus abyssi, and other species. MEROPS family A31 Casalot
Hydrogenase maturation protease family
Hydrogenase_maturation_protease_family
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Sulfolobaceae
Protein family around which DNA winds to form nucleosomes
DNA coils in a manner similar to nucleosome spools, as demonstrated in Thermococcus and Methanothermus. 33% of archaeal genomes have no identifiable histone
Histone
Genus of archaeaon
constrained scientific knowledge of these microorganisms, as previously, only Thermococcus sibiricus was recognized for its lipid growth capabilities. Therefore
Fervidicoccus
Various uses and techniques of polymerase chain reaction in the laboratory
polymerase isolated from Thermococcus litoralis. The polymerase from Thermococcus fumicolans (Tfu) has also been commercialized. Thermococcus kodakarensis (Tko
Variants_of_PCR
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanobacteriales
Chemical compound
shown that agmatine is an essential metabolite for the viability of Thermococcus kodakaraensis. The currently sequenced euryarchaeal and crenarchaeal
Agmatidine
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Halobacteriaceae
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanocaldococcaceae
Class of enzymes
hyperthermophilic archaeon: 2-ketoglutarate ferredoxin oxidoreductase from Thermococcus litoralis". J. Bacteriol. 178 (20): 5890–6. doi:10.1128/jb.178.20.5890-5896
2-oxoglutarate_synthase
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Thermococcales
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Sulfolobales
Organisms that assimilate formate or formic acid
Methylacidiphilum sp. RTK17.1 Cupriavidus necator Desulfurococcus amylolyticus Thermococcus onnurineus Methylobacterium extorquens Recent metagenomic studies indicate
Formatotrophs
Species of archaeon
roughly spherical, elongated and constricted appearance, similar to Thermococcus celer. Frequently, they occur as diploforms. Cells grown on solid supports
Pyrococcus_woesei
bacteria, with at least one member classified from archaea (TC# 2.A.42.1.7, Thermococcus barophilus). Proteins of the HAAAP family possess 403-443 amino acyl
HAAAP_family
Chemical compound
Trehalose Glycosyltransferring Synthase of the Hyperthermophilic Archaeon Thermococcus litoralis*". Journal of Biological Chemistry. 279 (46): 47890–47897.
Trehalose
Genus of archaea
significant difference of 14% in the GC Content with Thermococcus celer, the only representative of Thermococcus known at the time the study was done in 1987
Caldococcus
Chemical compound or substance produced by a living organism, found in nature
chemical compounds also, for example isoprenyl glycerol ethers 1 and 2 from Thermococcus S557 and Methanocaldococcus jannaschii, respectively. Several anti-infective
Natural_product
Mammalian protein involved in glycogen production
studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1". Proteins. 79 (2): 547–557. doi:10.1002/prot.22902
Glycogen_branching_enzyme
Main transmembrane structural unit of ATP-binding cassette transporter proteins
ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis". EMBO J. 19 (22): 5951–61. doi:10.1093/emboj/19.22.5951. PMC 305842
Transmembrane domain of ABC transporters
Transmembrane_domain_of_ABC_transporters
Family of transporters
transporter was cloned from the genome of the hyperthermophilic archaeon Thermococcus sp. KS-1. The cloned gene, snatA, encodes a protein of 216 amino acid
6TMS neutral amino acid transporter family
6TMS_neutral_amino_acid_transporter_family
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanomicrobiaceae
updake of genetic tools as well as resistance to culture contamination. Thermococcus kodakarensis, Pyrococcus abyssi, and Pyrococcus furiosus are the Thermococcales
List_of_model_organisms
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanoregula
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Thermofilaceae
Topics referred to by the same term
Gelert, 7th century Welsh saint Misumenops celer, the celer crab spider Thermococcus celer, a species of extremely thermophilic Archaea Laosaurus (Laosaurus
Celer
Gene family
ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis". The EMBO Journal. 19 (22): 5951–61. doi:10.1093/emboj/19
ABC_transporter
Chemical compound
be important for the heat resistance of thermophilic archaea such as Thermococcus kodakarensis. Queuine Kilpatrick MW, Walker RT (September 1981). "The
Archaeosine
Undersea unicellular organisms
include Archaea of phylum Thermoproteota (formerly Crenarchaeota) and Thermococcus. Production of methane through methanogenesis can be from degradation
Hydrothermal vent microbial communities
Hydrothermal_vent_microbial_communities
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanomicrobiales
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Thermoproteaceae
Hypothesis in evolutionary biology
Woese CR (1988). "Rooting the archaebacterial tree: the pivotal role of Thermococcus celer in archaebacterial evolution". Systematic and Applied Microbiology
Eocyte_hypothesis
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Sulfolobus
RNA family
distribution of SscA RNA is currently restricted to the genera pyrococcus and thermococcus (see Rfam page). Other RNAs identified with SscA include HgcC, HgcE,
SscA_RNA
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Halobacterium
Class of enzymes
litoralis". 2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis. Methods Enzymol. Vol. 331. pp. 144–58. doi:10.1016/S0076-6879(01)31053-4
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin)
3-methyl-2-oxobutanoate_dehydrogenase_(ferredoxin)
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanococcaceae
3' 3' ---AT ACATAGAAAACGCACATGGAAATTGAAG--- 5' PI-TliI H1 Thermococcus litoralis A chrm 5' TAYGCNGAYACNGACGGYTTYT 3' ATRCGNCTRTGNCTGCCTAARA
List of homing endonuclease cutting sites
List_of_homing_endonuclease_cutting_sites
B07 prefixes
200.825.800.650.400 – pyrococcus horikoshii MeSH B07.200.825.800.800 – thermococcus MeSH B07.200.850.800 – thermoplasma The list continues at List of MeSH
List_of_MeSH_codes_(B07)
Type of enzyme
the second-identified enzyme encoded by an intein found in the archaea Thermococcus litoralis. H-DreI (PDB: 1MOW) is the first synthetic homing endonuclease
Homing_endonuclease
litoralis". 2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis. Methods Enzymol. Vol. 331. pp. 144–58. doi:10.1016/S0076-6879(01)31053-4
Indolepyruvate ferredoxin oxidoreductase
Indolepyruvate_ferredoxin_oxidoreductase
Enzyme involved in tryptophan synthesis
furiosus shows that tPRAI has a TIM-barrel fold (Fig. 6). PRAI derived from Thermococcus kodakaraensis also expresses a similar TIM-barrel fold structure. The
Phosphoribosylanthranilate isomerase
Phosphoribosylanthranilate_isomerase
Genus of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanocalculus
Chemical compound
tetraterpenoids (structurally similar to lycopane) have been detected in Thermococcus hydrothermalis, a deep-sea hydrothermal vent archaea. Lycopane has also
Lycopane
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanospirillaceae
Type of virus that infects the domain of unicellular, prokaryotic organisms or Archaea
such as TKV4-like proviruses and pTN3-like integrative plasmids of Thermococcus, which encode proteins signature of Varidnaviria but do not appear to
Archaeal_virus
American astrobiologist
; Whitman, W. B.; Ng, J. D.; Garriott, O. K.; Hoover, R. B. (2007). "Thermococcus thioreducens sp. nov., a novel hyperthermophilic, obligately sulfur-reducing
Richard_B._Hoover
Seamount in Polynesia, southeast of the Austral Islands
found on Macdonald, including Archaeoglobus, Pyrococcus, Pyrodictium and Thermococcus as well as previously undescribed species. These bacterial communities
Macdonald_seamount
Genus of archaea
Acidilobus, Ferroplasma, Pyrobaculum, Pyrococcus, Staphylothermus, Thermococcus, Thermodiscus and Vulcanisaeta". The Journal of General and Applied Microbiology
Thermodiscus
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanothermaceae
Order of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". International
Halobacteriales
Family of archaea
Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int.
Methanocorpusculaceae
THERMOCOCCUS
THERMOCOCCUS
THERMOCOCCUS
THERMOCOCCUS
Boy/Male
Arabic, Muslim
Decorated Throne
Boy/Male
Latin
F: Ameaning bringer of joy. In the Divine Comedy, Beatrice was Dante's guide through Paradise,...
Girl/Female
Hindu, Indian
Night
Boy/Male
Indian
Personality
Girl/Female
British, English, French
Bright Fame; Female Version of Rupert; Famed; Shining
Boy/Male
Indian, Tamil
Name of Lord Shanmukha; God Murugan
Girl/Female
Christian & English(British/American/Australian)
Intent in Purpose
Girl/Female
Danish, German, Latin, Swedish
Flower Name Lily; Symbol of Innocence Purity and Beauty; Variant of Lillian
Boy/Male
Hebrew Biblical
Gathers.
Girl/Female
French
Crowned with laurels.
THERMOCOCCUS
THERMOCOCCUS
THERMOCOCCUS
THERMOCOCCUS
THERMOCOCCUS